Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2190g00007 ATGTCAACTAAAAACGGCCAACCCCTCGCGGCACCGCCGCCTCGTCCGACCGTCACTCTCCCGCCTCGACCTTCCATGGAGGCCTTCTTCACCGGTGGACTCGGCCTAAGCCCTGGCCCCATGACTCTTGTCTCTAGCTTCTTCTCCGACAGCCACCCTGACTCCGATTGCCGTTCTTTCTCTCAGCTGCTCGCCGGAGCTATGGCTTCGCCGCTTGCTCTCGGCGTCAGGCCAAGTTTCCCTCCGGAGAATTCCAACTCCAATTCCTCCACTTCTGAGGATGGAGCAAAGAAGAATTTGGGGTTCAAGCAGAGTAGACCAATGAATTTGGTTGTTGCTCGTTCCCCAATGTTTACAATCCCGCCTGGGCTTAGCCCTTCTGGTTTGCTTAATTCTCCGGGCTTCTTTTCGCCACAGAGCCCCTTTGGGATGTCCCACCAACAGGCTCTAGCACAGGTTACAGCTCAGGCTGTTCTAGCACAATCACAGATGCATTTGCAAGCTGATTTTCACCCATCTGCTGAAACAGACGCTCCTGAACCATTGGCAGTGCAGCCATCCAGTACTCCAGTTGAAGGATCAGAGCTGCAAGTGGCACCATCACTATTGGAACCTAAAGGTGCCCAAGTGGAAGTATCAGAAGCTTCTCCTGCTGACAACAAGTATCAAACTTCTTCTATGGGCATTGACAAACCAGCAGATGATGGCTATAACTGGCGTAAGTATGGACAGAAGCAGGTTAAGGGGAGTGACTATCCACGGAGCTACTATAAGTGCACACATCTGAATTGCCCTGTAAAGAAAAAGATTGAGCGTGCCCCTGATGGCCATATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGCCAAATAGGCGTGCTGCCAAAGATAATTGTGAATCAAATGAAAATAAAAGCATTCAAGTTATGTCTGAGTCAAATACACAGGGTTGGGTTGGAAATTCATTTGTCTTGGGTGAAAGCATGCCTGACCATTCAATGCGTGAGAGTGACCAGACCTGCAATCAAGAGGCTCCCAGACAGTCATCTGGATCACGTGAGAGTGAGGAAGTGCTTGATGCTAATATTATGGAAGAAGATGGAGATGTTGGTGAGCCTAACCCAAAAAGGAGGAGCACTGGGGTTGGGACTTCTGAAGCATCTTTGTCCCACAAGACTGTTACAGAACCTAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTTCAGGTGGCGCAAGTATGGCCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGATGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCTAAAGCTGTCATAACTACGTATGAGGGAAAACATAACCATGATGCGCCTGCTTCTAGAAATAGCAGCCATACCACAGCCACTACCAATTCAATGCCTTTAAAGCCACACAGAGTGACTTCTGGGAAGCACGCTTCGCTTAAAGATATGGATTTTGGAAACAATGACCAAATCCCAGCTGTTTTACGCTTAAAAGAGGAGCAAAACAGAGCACAAATATGA 1593 0.4771 MSTKNGQPLAAPPPRPTVTLPPRPSMEAFFTGGLGLSPGPMTLVSSFFSDSHPDSDCRSFSQLLAGAMASPLALGVRPSFPPENSNSNSSTSEDGAKKNLGFKQSRPMNLVVARSPMFTIPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSQMHLQADFHPSAETDAPEPLAVQPSSTPVEGSELQVAPSLLEPKGAQVEVSEASPADNKYQTSSMGIDKPADDGYNWRKYGQKQVKGSDYPRSYYKCTHLNCPVKKKIERAPDGHITEIIYKGQHNHEKPQPNRRAAKDNCESNENKSIQVMSESNTQGWVGNSFVLGESMPDHSMRESDQTCNQEAPRQSSGSRESEEVLDANIMEEDGDVGEPNPKRRSTGVGTSEASLSHKTVTEPKIIVQTRSEVDLLDDGFRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERSSTDPKAVITTYEGKHNHDAPASRNSSHTTATTNSMPLKPHRVTSGKHASLKDMDFGNNDQIPAVLRLKEEQNRAQI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2190g00007 530 MobiDBLite consensus disorder prediction 466 511 - -
Pral2190g00007 530 MobiDBLite consensus disorder prediction 80 98 - -
Pral2190g00007 530 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 MobiDBLite consensus disorder prediction 476 493 - -
Pral2190g00007 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 490 IPR044810 GO:0003700
Pral2190g00007 530 FunFam WRKY transcription factor 221 293 - -
Pral2190g00007 530 Pfam WRKY DNA -binding domain 415 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 FunFam WRKY transcription factor 33 401 467 - -
Pral2190g00007 530 Gene3D WRKY domain 218 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 Gene3D WRKY domain 399 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 ProSiteProfiles WRKY domain profile. 409 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 MobiDBLite consensus disorder prediction 285 304 - -
Pral2190g00007 530 MobiDBLite consensus disorder prediction 324 394 - -
Pral2190g00007 530 MobiDBLite consensus disorder prediction 208 239 - -
Pral2190g00007 530 MobiDBLite consensus disorder prediction 1 26 - -
Pral2190g00007 530 SUPERFAMILY WRKY DNA-binding domain 232 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 MobiDBLite consensus disorder prediction 173 195 - -
Pral2190g00007 530 SUPERFAMILY WRKY DNA-binding domain 406 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 MobiDBLite consensus disorder prediction 285 305 - -
Pral2190g00007 530 MobiDBLite consensus disorder prediction 75 103 - -
Pral2190g00007 530 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2190g00007 530 SMART WRKY_cls 414 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2190g00007 Pral-Chr2190 53147 57079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2190g00007 15 525 WRKY Transcription Factor Family AT2G03340 50.758 3.19e-145 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2190g00007 WRKY 5.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2190g00007 - - gmx:100796679 707.597