Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral218g00008 ATGGAGGTCAGGGATGTTGTTAATAATGGGGTCACGGTGGTCCGATCAGATGCTCCGTCGAACTACCATGTAGCTCCGAGGACTGAAGTCCCGTCTTCCCTCGGGGGATCAACGGCACCGGCACCTCAAGGGAGTGTTGCGCCACCTCAACCAGTTGTTGCGGGAGTGGCTACGGCTGCGACAACGATGCCGGTGAAGAAGAAGAGGGGTCGGCCGAGGAAGTACGGACCAGATGGGTCAGTGGCAATGGCTCTATCTCCGTCGCCGTTATCTTCTTCGGCTCCGCCGGCTGTGATCGATTTCTCGGCCGGCAAACGCGGTAAAGTGCGCCCTGCTAACTCAGTACGCAAAGCCAAATTCGAAGTTGAAGATTCAGGTGAATGGGTTGCAGGCTCCGTTGGTACTAATTTTACACCTCATATCATTGCCATTAATTCCGGGGAGGACATCACAATGAAGATAATATCATTTTCTCAGCAAGGGCCGCGAGCTATATGCATTCTTTCTGCAAGTGGAGTTATATCAAGCGTCATGCTTCGGCAGGCTGATTCTTCTGGGGGTACATTGACACATGAGGGACGGTTTGAAATTTTGTCATTATCTGGCTCATTCATGCCGAATGAAAGTGCAGGAACACGAAGCAGATCGGGTGGCATGAGTGTTTCTTTAGCAAGTCCAGATGGGCGCGTCATAGGGGGTAGTGTAGCTGGTTTGTTGTTGTCTCTTTCCATAATTCAGGTTGTGGTTGGCAGTTTTCTGGCTGGAAACCAGCATGATCTGAAGACAAAGAAACAGAAACATGAGATTGTATCAACAGCAATTGTTCCTTTGTCTACTGCTGATCCAATACCTATCCTGTCATCTCCACCTTCCTTCCCTGCTCACAATTGGTCTGCATTGCCTTCTGATACGAGGAACAACATGACCACTGACATTAATGTGCCTCTATCTGCAGGGTAA 960 0.4979 MEVRDVVNNGVTVVRSDAPSNYHVAPRTEVPSSLGGSTAPAPQGSVAPPQPVVAGVATAATTMPVKKKRGRPRKYGPDGSVAMALSPSPLSSSAPPAVIDFSAGKRGKVRPANSVRKAKFEVEDSGEWVAGSVGTNFTPHIIAINSGEDITMKIISFSQQGPRAICILSASGVISSVMLRQADSSGGTLTHEGRFEILSLSGSFMPNESAGTRSRSGGMSVSLASPDGRVIGGSVAGLLLSLSIIQVVVGSFLAGNQHDLKTKKQKHEIVSTAIVPLSTADPIPILSSPPSFPAHNWSALPSDTRNNMTTDINVPLSAG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral218g00008 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 255 - -
Pral218g00008 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Pral218g00008 319 ProSiteProfiles PPC domain profile profile. 134 276 IPR005175 -
Pral218g00008 319 MobiDBLite consensus disorder prediction 18 50 - -
Pral218g00008 319 FunFam AT-hook motif nuclear-localized protein 1-like 139 270 - -
Pral218g00008 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 40 273 IPR039605 GO:0003680
Pral218g00008 319 CDD DUF296 138 252 IPR005175 -
Pral218g00008 319 Gene3D - 139 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral218g00008 Pral-Chr218 161252 166020 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral218g00008 3 314 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.101 9.89e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral218g00008 - - qsa:O6P43_024280 391.734