Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral218g00004 ATGGACCCAATTACAGCACATCCTCATTCTCTTCCTCCTCCATTCCACACTAGGGATCTTCATCCACACCATCAATTTCACTCTCTCCATCAAAACACAGAAGATGAGCAAAGCGGAAGCAGCGGCGGCCTCAACCTCGCTCAGAAAAGGGATCGAGAAGAAAACAGCAACAGCGAGGGGAAAGAGATGGCGGCGGCGGCTGGCGCCGGCGAAGGTGAAATCACCAGAAGACCTCGAGGAAGACCTGCCGGCTCCAAGAACAAACCCAAGCCGCCTATTATTATCACGCGCGACAGCGCAAACGCGTTAAGAACCCACGTCATGGAGGTGGCCGACGGCTGCGACATCGTCGAGAGCGTCTCCAACTTCGCACGGCGGAGGCAGAGAGGGGTTTGCATAATGAGTGGGACTGGCACAGTAACGAACGTTACTCTGCGGCAGCCAGCTTCTCCCGGAGCCGTCGTCACTCTCCATGGAAGGTTCGAGATATTGTCACTGGCCGGATCATTCTTACCCCCGCCGGCTCCTCCGGCCGCTTCAGGATTAACCATATATTTAGCAGGAGGACAAGGGCAAGTCGTCGGAGGAAGCGTGGTTGGGACACTAATAGCTTCCGGTCCAGTGGTGATCATGGCGGCATCGTTCAGTAACGCTGCGTATGAAAGGCTTCCTTTGGAAGAAGATGATCCCTCCATGCCGATTCAAGGAGGCGGCGGCGGCGAAGGCGGAATCGGGTCGCCAGGAGGTGGCGGTCAACAGCAAGCGGGACAGCTTTTAGGGGACGGAAACGCAACGGCTCCACTTTTCCATGGTCTGCCTCCGAATCTTCTGAATTCTATACAGATGCCATCAGAAGCGTTCTGGGCTACAGGTCGCCCTCCATACTGA 888 0.5597 MDPITAHPHSLPPPFHTRDLHPHHQFHSLHQNTEDEQSGSSGGLNLAQKRDREENSNSEGKEMAAAAGAGEGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLEEDDPSMPIQGGGGGEGGIGSPGGGGQQQAGQLLGDGNATAPLFHGLPPNLLNSIQMPSEAFWATGRPPY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral218g00004 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
Pral218g00004 295 MobiDBLite consensus disorder prediction 14 31 - -
Pral218g00004 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 290 IPR014476 GO:0003680
Pral218g00004 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 229 - -
Pral218g00004 295 PIRSF ESCAROLA 16 295 IPR014476 GO:0003680
Pral218g00004 295 ProSiteProfiles PPC domain profile profile. 100 236 IPR005175 -
Pral218g00004 295 MobiDBLite consensus disorder prediction 228 262 - -
Pral218g00004 295 CDD DUF296 104 171 IPR005175 -
Pral218g00004 295 MobiDBLite consensus disorder prediction 1 94 - -
Pral218g00004 295 FunFam AT-hook motif nuclear-localized protein 103 230 - -
Pral218g00004 295 Gene3D - 103 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral218g00004 Pral-Chr218 44829 46607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral218g00004 1 295 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 57.958 2.21e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral218g00004 - - qsu:112016192 436.417