Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2187g00002 ATGGAGCACAAGAAGAAACTGAAGGAGGAGTTCGGTATTGAACCATGGACATTTGAGCAGAAACTTGGGGAGGCTGTGTTTATTCCTGCTGGATGCCCTCACCAAGTGAGAAATCTCATGTCATGCACAAAAGTTGCTGTGGATTTTGTGTCCCCAGAAAACCTCCATGAGTGTCTGCGTTTAACTAATCAGTTCCGGCAGCTTCCCAAGAACCACAGGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTGTATGCTGCTGACCAGATTCTCAAAGATTTTGAGTCCTTGCTCAAGTGTGCTTGA 312 0.4487 MEHKKKLKEEFGIEPWTFEQKLGEAVFIPAGCPHQVRNLMSCTKVAVDFVSPENLHECLRLTNQFRQLPKNHRAREDKLEIKKMIVYAADQILKDFESLLKCA 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2187g00002 103 SUPERFAMILY Clavaminate synthase-like 3 89 - -
Pral2187g00002 103 Pfam JmjC domain, hydroxylase 5 49 IPR003347 -
Pral2187g00002 103 Gene3D Cupin 1 75 - -
Pral2187g00002 103 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 100 IPR045109 GO:0032454|GO:0033169
Pral2187g00002 103 ProSiteProfiles JmjC domain profile. 1 66 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2187g00002 Pral-Chr2187 13801 23000 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral2187g00002 JmjC 3.8e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2187g00002 K15601 - gmx:100797860 191.43