Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2185g00008 ATGGACAAAGCATGGGGTCTTGCTCTTGATTCTTCTCCCGCCGCCGCTGCTTTCTCCCCCCACACCATGCTTCCCTCTTTAGGCTTCCCCGTTAATCTCACTCGCCCCTCCGCCGCCGACTCCCGCCTCCCCCCCGGCGAGCTCGACTTCTTCTCCGATCGCAACAACCCTCCTCCTCCTCCTCCCCCTCTCAAACCCGTCAAGAACGAGAATCCTCCCCCCGAATCACCCCCTTCCCATGTCAACACTGGCTTGCAACTCCTTACTGCTCATACTGGCAGCGATCAGTCTACGGTGGACGATGGAGTTTCATCTGATGCCGAAATCAAGCGAGCCAAGAGTTCAACCGAGTTGGCGCAACTGCAAGAGGAGCTTCAACGTATGAATGCTGAAAACGTGAAACTGCGGGACATGTTGAGTCACGTGAGCAGTAATTACGCGGCTCTGCAGATGCATCTTGTCACTTTAATGCAGCAGCAGCAGCAACAGATTCAACGTACGCAGAGCACAGGAAATGAGGTTGTTCAATCAAAACCTGATGACAAAAGAGAAATTGCACCGATGCCGCTTCTGGAATTGCGGCCTAGAAGTGGAACAGCTGAAGTAGATAACGAGATATCCCATTCAACTTCTGATGAAAGAACAAGGTCCACCACCCCTCCTGTTAACAACAACAGTGGTAAGAATGAGAGGGAAGAGAGCCCAGACTCAGATGTTCATCCCCAAGGCTGGGGCAGTGGTCCTAACAAACTTCAGAAGCTGAACCCCTCCCCAAATTCCACCGACCCATCAACCAGTACCGCCGCAGAAGCCACTATGAGGAAAGCTCGCGTCTCAGTTCGTGCCAGATCAGAGGCACCCATGATCAGTGACGGGTGTCAGTGGCGAAAATACGGACAGAAAATGGCAAAGGGAAACCCTTGCCCTCGTGCTTACTATAGATGCACCATGGCGGTCGGTTGCCCAGTTCGCAAACAAGTACAACGTTGCGCGGAGGACAGGACGATTTTGATAACTACCTATGAAGGAAGTCATAACCATCCGCTGCCGCCGGCGGCGATGGCGATGGCATCAACGACGACTGCAGCTGCTAGCATGTTGTTGTCGGGTTCGATGTCGAGTGCAGACGGAATAATGCATCCGAACTTACTGGCCAGGGCTATTCTTCCATGTTCGTCTAGCATGGCTACGCTTTCGGCTTCGGCTCCGTTTCCCACTATAACATTGGACCTCACTCACAATTCAAACAGCAACATTAACAACCCTATGCAATTCCAGAGACCTCCATTTCAGGTACCTAATTTCCAAGGGCAGCCTCAGGTTCAACCAACGGCGTCAGGTCAACATCACTTGGCTCAGGCATTTTCGCAAGCACTTTACAATCAGTCCAAGTTCTCTGGCCTTCACTTGTCCCAGGATATGGGTTCGTCGTCTTCATCTTCTTCCCAATTAGCCCACCAACCTCCCAGGCCGGTGCAGCCAAGCCAACCGCCGCAGCCATCATTGGCAGACACGGTGAACGCGGCTACCGCGGCCATCACGGCCGACCCAAACTTCACAGCGGCGCTCGCGGCCGCCATCTCCTCCATCATTAATGGCGGCGGCGTGCCCTCGAGCAGCAACAACAACAATAGCAGCGGCAATCCCAACATCACATGTGGTACCACAATCAGCAGTTTCTCAGGGAATCCGTAA 1695 0.5339 MDKAWGLALDSSPAAAAFSPHTMLPSLGFPVNLTRPSAADSRLPPGELDFFSDRNNPPPPPPPLKPVKNENPPPESPPSHVNTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELAQLQEELQRMNAENVKLRDMLSHVSSNYAALQMHLVTLMQQQQQQIQRTQSTGNEVVQSKPDDKREIAPMPLLELRPRSGTAEVDNEISHSTSDERTRSTTPPVNNNSGKNEREESPDSDVHPQGWGSGPNKLQKLNPSPNSTDPSTSTAAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMHPNLLARAILPCSSSMATLSASAPFPTITLDLTHNSNSNINNPMQFQRPPFQVPNFQGQPQVQPTASGQHHLAQAFSQALYNQSKFSGLHLSQDMGSSSSSSSQLAHQPPRPVQPSQPPQPSLADTVNAATAAITADPNFTAALAAAISSIINGGGVPSSSNNNNSSGNPNITCGTTISSFSGNP 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2185g00008 564 MobiDBLite consensus disorder prediction 198 212 - -
Pral2185g00008 564 MobiDBLite consensus disorder prediction 80 103 - -
Pral2185g00008 564 MobiDBLite consensus disorder prediction 537 564 - -
Pral2185g00008 564 Coils Coil 104 138 - -
Pral2185g00008 564 ProSiteProfiles WRKY domain profile. 284 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2185g00008 564 MobiDBLite consensus disorder prediction 33 111 - -
Pral2185g00008 564 Pfam WRKY DNA -binding domain 291 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2185g00008 564 MobiDBLite consensus disorder prediction 418 450 - -
Pral2185g00008 564 MobiDBLite consensus disorder prediction 164 283 - -
Pral2185g00008 564 MobiDBLite consensus disorder prediction 1 21 - -
Pral2185g00008 564 MobiDBLite consensus disorder prediction 470 504 - -
Pral2185g00008 564 FunFam probable WRKY transcription factor 31 274 351 - -
Pral2185g00008 564 Gene3D WRKY domain 274 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2185g00008 564 MobiDBLite consensus disorder prediction 213 228 - -
Pral2185g00008 564 SMART WRKY_cls 289 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2185g00008 564 MobiDBLite consensus disorder prediction 248 272 - -
Pral2185g00008 564 SUPERFAMILY WRKY DNA-binding domain 282 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2185g00008 564 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 90 545 IPR044810 GO:0003700
Pral2185g00008 564 MobiDBLite consensus disorder prediction 470 489 - -
Pral2185g00008 564 MobiDBLite consensus disorder prediction 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2185g00008 Pral-Chr2185 22783 25559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2185g00008 40 548 WRKY Transcription Factor Family AT1G62300 51.412 6.82e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2185g00008 WRKY 5.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2185g00008 - - pcin:129286757 667.922