Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2184g00002 ATGGAGGTAAGTGGAAGAAAGCTGGTATGCCAAGTTCAAGAGTTCATCAGCATAGACTGTGGAGGCACTGGTAATTACACTGATAAAAGCACAGGACTAGCATGGATTTCAGACAATGGGATTATGAACCATGGCAACCAAGTGGAAGTAGAAGGTCCAAATGGAAACAGGATACAGTATCAGAAACGCAGAGACTTCCCCACAGACAACAGGAAATACTGTTACACACTAAACACACGGGAGAGAAGAAGATACCTGGTGCGAGCAACGTTTCAGTATGGAAACTTGAAAAGTGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCCACTGTGTCAATATATGATGCCTCAAGAGTTTATGTGAAGGAAATGATTATCAGGGCCCCCTCAAACTCTATTGATGTTTGCTTGTGTTGTGCTACCACTGGTTCACCATTCATATCAACTCTAGAGCTCAGGCCCTTGAATCTTTCAATGTATGCCACAGATTTTGAAGACAATTTCTTCTTAAAAGTCGCTGCAAGAATGAATTTTGGCGCTTCAAGTGAGGATGCTATCAGGTATCCTGATGACCCCTATGATAGAATTTGGGAATCAGATCTTGTTAAAAGGCAAAATTATCTTGTTGGGGTGGCCCCAGGCACCGAAAGGATTAATACAACAAGGGACATAGAGATAGGAAGTAGAGAATGCCCACCTGTCAAAGTTATGCAAACTGCAGTTGTTGGCACAAGGGGGGTACTCAGCTACAGAACAAACCTGGAAGACTTCCCAGCCAATGCTCGAGCTTATGCTTATTTCGCAGAGATTCAAGATCTGGGTAAGAATGAGACTCGAAAATTCAAAATGGAGCAGCCTTTTATACCTGACTATAGCAATGCAGTGGTCAACATAGCTGAGAATGCCAATGGCAGCTACACTCTTTATGAACCTAGTTACATGAATGTGACTCTGGATTTTGTTCTGTCATTCTCCTTTGTTAAGACCCGGGATTCTACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAATACCAACTGATTGCTCCAAAGACTGACAGGCAAGATTTGACTGTTGTAAATGAATTTTCCTCCATGTCCGCTGAAAGTGTCCAGAAGAACGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGCAGTGCTGCCACGCTTCCAAGAATCACAAAAATAAACCTGTCAAGAAGGAAAGTTACGGGCACAATCCCATCTGATATTAACAAAGTGGAAGAATTGACAGAATTGTGGTTGGATGGAAATTTGATTACTGGCTCACTGCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACCGATTGAGGGGTCCATTACCATCTTACCTGGGTAGTTTGCCAAGCTTAGAAGCACTGTTCATACAAAATAACTCATTTACTGGGGAAATACCAGCAGGATTAGTATCTGGAAAGATCATTTTCAACTATGACGGTAATCCTGGACTACATAAAGGGACCAAGAAACACTTCAAGCTGATACTCGGAATTTCAATAGGAGTTCTTGTGATTCTCGCAATATTATTTTTAGGAAGTTTGATGCTAATGCATAATCTTCGGAAGGCATCTCAACAGAAATGTGATGAAAATGGTATCTCTGGACGCAGTATGACCAAACCTATAGGTCCATACTCATTTGTTCGGGGAGGGAGTCTAATGGAGGAGGGCATTGCATGCTATATGGGGCTCTCAGACTTGAAAGAAGCTACTAATAATTTTGCAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTGTACTATGGGAAAATGAAAGATGGAAAAGAAGTTGCTGTTAAAATTATGAGTGATTCATCCACCTATGGAAACCATCAATTTGTCACTGAGGTAGCCCTTCTGTCAAGAATTCATCATAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCGTATTCTGGTTTACGAGTATATGCACAATGGCACCTTGCGGGATCACATTCATGGTTCTGCTAAGCAGGAAAACTTAGGCTGGTTAATTCGTCTTCGCATAGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACATACAGGATGCAATCCTAGTATCATACACCGAGATGTGAAGACCAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTTTCAGATTTTGGACTCTCAAGATTAGCTGAAGAAGATTTAACTCACATATCAAGTATTGCCAGGGGAACTGTAGGTTACTTGGATCCTGAGTACTATGCAACTCAGCAATTGACCGAGAAAAGTGACGTGTATAGCTTTGGAGTTGTACTTCTTGAACTGATCGCCGGAAGAAAACCTGTATCATCAGAAGATTACGGTGCTGAAATGAACATTGTTCACTGGGCAAGGTCATTAATTCGCAGAGGCGATGTGATAAGCATCATGGATCCATGTTTAGTGGGGAACGTCAAAACCGAATCGATTTGGAGGGTTGCTGAAGTCGCACTGCAATGCGTAGAACAACACGGGGCGTGCAGGCCCAGGATGCAAGAGATCATTCTGGCTATACAAGAAGCAATCAACATCGAGAAAGGAACAAACAGAAGCATGAAATTATCATCCTCAGGTAGTTCGAAGGCTCAATCTTCGAGGAAAACATTACTCACAAGCTTTCTCGAAATTGAGAGCCCTGACTTGTCCAATAATTGCCTCCCTACCGCAAGATAA 2757 0.4204 MEVSGRKLVCQVQEFISIDCGGTGNYTDKSTGLAWISDNGIMNHGNQVEVEGPNGNRIQYQKRRDFPTDNRKYCYTLNTRERRRYLVRATFQYGNLKSGDTYPQFQLYLDATKWATVSIYDASRVYVKEMIIRAPSNSIDVCLCCATTGSPFISTLELRPLNLSMYATDFEDNFFLKVAARMNFGASSEDAIRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTRDIEIGSRECPPVKVMQTAVVGTRGVLSYRTNLEDFPANARAYAYFAEIQDLGKNETRKFKMEQPFIPDYSNAVVNIAENANGSYTLYEPSYMNVTLDFVLSFSFVKTRDSTRGPLLNAMEISKYQLIAPKTDRQDLTVVNEFSSMSAESVQKNEGDPCVPTPWEWVNCSAATLPRITKINLSRRKVTGTIPSDINKVEELTELWLDGNLITGSLPDMSNLINLKIVHLENNRLRGPLPSYLGSLPSLEALFIQNNSFTGEIPAGLVSGKIIFNYDGNPGLHKGTKKHFKLILGISIGVLVILAILFLGSLMLMHNLRKASQQKCDENGISGRSMTKPIGPYSFVRGGSLMEEGIACYMGLSDLKEATNNFAKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSSTYGNHQFVTEVALLSRIHHRNLVPLIGYCEEECQRILVYEYMHNGTLRDHIHGSAKQENLGWLIRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYATQQLTEKSDVYSFGVVLLELIAGRKPVSSEDYGAEMNIVHWARSLIRRGDVISIMDPCLVGNVKTESIWRVAEVALQCVEQHGACRPRMQEIILAIQEAINIEKGTNRSMKLSSSGSSKAQSSRKTLLTSFLEIESPDLSNNCLPTAR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2184g00002 918 Gene3D Transferase(Phosphotransferase) domain 1 672 890 - -
Pral2184g00002 918 Gene3D Phosphorylase Kinase; domain 1 580 671 - -
Pral2184g00002 918 SUPERFAMILY Protein kinase-like (PK-like) 586 863 IPR011009 -
Pral2184g00002 918 ProSitePatterns Protein kinases ATP-binding region signature. 602 624 IPR017441 GO:0005524
Pral2184g00002 918 ProSiteProfiles Leucine-rich repeat profile. 427 449 IPR001611 GO:0005515
Pral2184g00002 918 ProSiteProfiles Protein kinase domain profile. 596 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2184g00002 918 Gene3D Ribonuclease Inhibitor 359 500 IPR032675 -
Pral2184g00002 918 Pfam Protein tyrosine and serine/threonine kinase 598 863 IPR001245 GO:0004672|GO:0006468
Pral2184g00002 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Pral2184g00002 918 Pfam Malectin-like domain 18 351 IPR024788 -
Pral2184g00002 918 SMART serkin_6 596 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2184g00002 918 SUPERFAMILY L domain-like 387 494 - -
Pral2184g00002 918 FunFam serine/threonine-protein kinase PBS1-like 575 671 - -
Pral2184g00002 918 CDD STKc_IRAK 602 863 - -
Pral2184g00002 918 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 396 489 - -
Pral2184g00002 918 PANTHER OS07G0107800 PROTEIN-RELATED 446 870 - -
Pral2184g00002 918 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 672 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2184g00002 Pral-Chr2184 11040 16347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2184g00002 8 918 Receptor kinase-like Gene Family AT1G67720 68.928 0.0 1279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral2184g00002 Malectin_like 1.8e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2184g00002 - - gmx:100807148 1511.89