Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2181g00006 ATGATTTGTGGGGATATGAGGTGGAAGCGACTGGAAACTTTGTGGGTTGGCATTAGAGAAATGGGGCAAACTGGAGAAAGATGCAGAGCGTTGGAAAGACATATATATTGGACGGAATTCGCTCCCAATAGACACCAATTTTTCAAGCTAATGATGGGCGATTTCAGAAACCAGCTGCGAATTCCAAGAAAGTTTGTGAGTCATTTTAAGGAGGAACTACGGAGTGCTGCAAGACTTATAGGGCCGAGTAGAAATGTGTGGATTGTGAAAATTGCAAGAACTGATGATGATATTGTTTTTCAGATTGGTTGGGAAAAATTCGTGCAGGACCACAGTTTGGCAGAAAGAGATTTTCTTGTCTTCCACTACATTGGATACTCCTCTTTCAATGTCTCCATTTTTGATGAAACAGGATGTGAAAGAGAAGGTGCTTTTTTCGTCAATAAACACATTTCGTGCACTAGAAATGAATGCTTTCTTCAAAATGACGAGGAGAAAATTCTGCAAATTACTGATGTGGAAGAAACGGAGGGAAAGGTAAAGAAAGATAAACTAAAAGGTAGAGATGGTGCGATCGGAGAGGTGCGAGAAAGAAACCTGAAAAGCAAAACTTCGGTGCTCGTTGGAACCAGCTTTGAGGCCAGCAATTCAAACATAGAAACTTTTGGTGATAGGAAAGAAGACCTCTGGCCGAAAAGAAAAAAGTAA 708 0.4068 MICGDMRWKRLETLWVGIREMGQTGERCRALERHIYWTEFAPNRHQFFKLMMGDFRNQLRIPRKFVSHFKEELRSAARLIGPSRNVWIVKIARTDDDIVFQIGWEKFVQDHSLAERDFLVFHYIGYSSFNVSIFDETGCEREGAFFVNKHISCTRNECFLQNDEEKILQITDVEETEGKVKKDKLKGRDGAIGEVRERNLKSKTSVLVGTSFEASNSNIETFGDRKEDLWPKRKK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2181g00006 235 PANTHER B3 DOMAIN-CONTAINING 42 173 - -
Pral2181g00006 235 Gene3D - 40 139 IPR015300 -
Pral2181g00006 235 SUPERFAMILY DNA-binding pseudobarrel domain 41 139 IPR015300 -
Pral2181g00006 235 CDD B3_DNA 47 135 IPR003340 GO:0003677
Pral2181g00006 235 ProSiteProfiles B3 DNA-binding domain profile. 44 137 IPR003340 GO:0003677
Pral2181g00006 235 SMART B3_2 47 137 IPR003340 GO:0003677
Pral2181g00006 235 Pfam B3 DNA binding domain 47 136 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2181g00006 Pral-Chr2181 33214 35845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2181g00006 21 149 REM Transcription Factor Family AT4G33280 40.458 3.34e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral2181g00006 B3 4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2181g00006 - - qsa:O6P43_033778 188.734