Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2181g00005 ATGGGGCAAACTGGAGAAAGATGCAGAGCGTTGGAAAGACATATATATTGGACGGAATTCGCTCCCAATAGACACCAATTTTTCAAGCTAATGATGGGCGATTTCAGAAACCAGCTGCGAATTCCAAGAAAGTTTGTGAGTCATTTTAAGGAGGAACTACGGAGTGCTGCAAGACTTATAGGGCCGAGTAGAAATGTGTGGATTGTGAAAATTGCAAGAACTGATGATGATATTGTTTTTCAGATTGGTTGGGAAAAATTCGTGCAGGACCACAGTTTGGCAGAAAGAGATTTTCTTGTCTTCCACTACATTGGATACTCCTCTTTCAATGTCTCCATTTTTGATGAAACAGGATGTGAAAGAGAAGGTGCTTTTTTCGTCAATAAACACATTTCGTGCACTAGAAATGAATGCTTTCTTCAAAATGACGAGGAGAAAATTCTGCAAATTACTGATGTGGAAGAAACGGAGGGAAAGGTAAAGAAAGATAAACTAAAAGGTAGAGATGGTGCGATCGGAGAGGTGCGAGAAAGAAACCTGAAAAGCAAAACTTCGGTGCTCGTTGGAACCAGCTTTGAGGCCAGCAATTCAAACATAGAAACTTTTGGTGATAGGAAAGAAGACCTCTGGCCGAAAAGAAAAAAGTAA 648 0.4028 MGQTGERCRALERHIYWTEFAPNRHQFFKLMMGDFRNQLRIPRKFVSHFKEELRSAARLIGPSRNVWIVKIARTDDDIVFQIGWEKFVQDHSLAERDFLVFHYIGYSSFNVSIFDETGCEREGAFFVNKHISCTRNECFLQNDEEKILQITDVEETEGKVKKDKLKGRDGAIGEVRERNLKSKTSVLVGTSFEASNSNIETFGDRKEDLWPKRKK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2181g00005 215 SUPERFAMILY DNA-binding pseudobarrel domain 21 119 IPR015300 -
Pral2181g00005 215 PANTHER B3 DOMAIN-CONTAINING 22 153 - -
Pral2181g00005 215 ProSiteProfiles B3 DNA-binding domain profile. 24 117 IPR003340 GO:0003677
Pral2181g00005 215 CDD B3_DNA 27 115 IPR003340 GO:0003677
Pral2181g00005 215 Gene3D - 20 119 IPR015300 -
Pral2181g00005 215 SMART B3_2 27 117 IPR003340 GO:0003677
Pral2181g00005 215 Pfam B3 DNA binding domain 27 116 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2181g00005 Pral-Chr2181 33214 36384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2181g00005 1 129 REM Transcription Factor Family AT4G33280 40.458 1.44e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral2181g00005 B3 3.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2181g00005 - - qsa:O6P43_033778 188.734