Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2179g00007 ATGGCTCTACCAGCAGTGTCCTCTTGTATTGATTACAAATGGAAGTATGACGTGTTTCCTAGTTTTCATGGTGAAGACAGTCGGTTAAGTTTCGTTAGCTTTCTTCGCGGATCTCTACATGAAAGAGGAATCCGTGTCTTTATGGATGATGAGCACATCAGAACGGGAGAAGAAATCACACCAGCACTTATCAAAGCCATAAGAGAATCCAGGATAGCTATCATAGTTTTCTCCGAGAACTATGCCAACTCAACGTTCTGCCTGCAGGAACTTGTAGAGATTCTCAAATGCTTTAAAGAAGAAGGTCGATTAATATATCCAGTATTTTACTATGTGGATCCATCAGAGTTGCGACGTCCGAGAGCAAGCTATGCAGAGGCTTTGGCCCGATTGGAGGAAAGATTTAAGGACAACAAACAACAAGTAGAAAATTGGAGGTTGGCTTTGTCCCAAGCAGCTAATTTGAAAGGGTGTCATCTCAAAGCCAAGATTGCAAATGAGCAAGAACATATTACAGAGATCACCAATGAAGTATCAGCGAGGATTAATCGTATTCATAATCATTTACACGTTACTCAATACCCTGTTGGACTTGTGTCTCGGGTGAAAGAAGTGTTCTCACATTTAGATCTTTGGTCTACTAAGAAAAATAAAATGGTTGGAATTGTGGGACCTGGTGGAATAGGTAAATCAACGATTGCAAGAGCCTTGTATAATTTGATTGCTGATCATTTTGAAGGCTTATGTTTTCTTCCTAATGTGAGGGAAAAGTCTAGAATGCCAAATGGTTTGGCACATCTTCAAGAGACATTGCTTTGTAAATTAGTCAAGGAGAAAGATCTCAAATTGGGTGATTTGCATGAAGGAATACCAATAATAAAACATAGGCTTGGCCACAAGAAAATTCTTTTGATCATTGATGATGTTGATGAATTGAAACAGTTAGAAGCTCTAGCTGGAAGTTGTGATTGGTTTGGTCCTGGAAGTAGAATTGTCATAACAACTAGAAATAAACAGTTGTTCACAAGTTCTCATGTTAAGAGCATTTATAATGCTAGGGAATTACATGATGAGGAATCTCTTCAATTGCTTTGTTGGCATGCCTTTAAAAAGGAGAATGTGGAGTTTGATTTCATGGAGGTTTCTAAGCGTGCAATACGTTATTGTTGTGGATTTCCATTAGTCTTAAAAGTGACTGGTTCTCACTTATGCGGTAGAGGAGTCAACGAATGGCACTCTGCATTGGATCAATTTAAAAGAATTCCACAAGGAGAAGTTTTGGAAGTCCTTAGATTAAGCTATGATGCTTTAGGAGAATTTGAGAAAGAAATTTTCCTACACTTGGCTTGTTTTTCCAAAGGTGAGGAATTAGGAGAAGTTAAGGGCATGTTGTTATGTTTATATGGAATCCCACTGGATAATGTTATTAATGTTCTGGTCAATAAATCCCTCATAAGGATTGAAGGAGATCAGGTGTTAATGCATGACGTGATTGTAGATATGGGTAAAGAAATTGTTCGACAAGAATCACCAAATGAACCCGGTAAAAGAAGTAGGTTATGGTTCTACCAAGATATTCTTCATGTTTTAAATCGAAACACAGGAACCAATAAAGTGGGAACAATGAAATACAAATGCAATGGAGTGGAAAGGCATTCATGA 1662 0.3803 MALPAVSSCIDYKWKYDVFPSFHGEDSRLSFVSFLRGSLHERGIRVFMDDEHIRTGEEITPALIKAIRESRIAIIVFSENYANSTFCLQELVEILKCFKEEGRLIYPVFYYVDPSELRRPRASYAEALARLEERFKDNKQQVENWRLALSQAANLKGCHLKAKIANEQEHITEITNEVSARINRIHNHLHVTQYPVGLVSRVKEVFSHLDLWSTKKNKMVGIVGPGGIGKSTIARALYNLIADHFEGLCFLPNVREKSRMPNGLAHLQETLLCKLVKEKDLKLGDLHEGIPIIKHRLGHKKILLIIDDVDELKQLEALAGSCDWFGPGSRIVITTRNKQLFTSSHVKSIYNARELHDEESLQLLCWHAFKKENVEFDFMEVSKRAIRYCCGFPLVLKVTGSHLCGRGVNEWHSALDQFKRIPQGEVLEVLRLSYDALGEFEKEIFLHLACFSKGEELGEVKGMLLCLYGIPLDNVINVLVNKSLIRIEGDQVLMHDVIVDMGKEIVRQESPNEPGKRSRLWFYQDILHVLNRNTGTNKVGTMKYKCNGVERHS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2179g00007 553 Gene3D - 183 351 IPR027417 -
Pral2179g00007 553 Gene3D - 9 182 IPR035897 -
Pral2179g00007 553 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral2179g00007 553 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
Pral2179g00007 553 Gene3D - 354 438 IPR042197 -
Pral2179g00007 553 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Pral2179g00007 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 448 IPR027417 -
Pral2179g00007 553 SMART till_3 15 155 IPR000157 GO:0007165
Pral2179g00007 553 Pfam TIR domain 15 182 IPR000157 GO:0007165
Pral2179g00007 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 530 IPR044974 GO:0006952
Pral2179g00007 553 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral2179g00007 553 PRINTS Disease resistance protein signature 296 310 - -
Pral2179g00007 553 PRINTS Disease resistance protein signature 389 403 - -
Pral2179g00007 553 PRINTS Disease resistance protein signature 219 234 - -
Pral2179g00007 553 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral2179g00007 553 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2179g00007 Pral-Chr2179 79620 83169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2179g00007 218 521 WRKY Transcription Factor Family AT5G45050 34.098 5.15e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2179g00007 - - pcin:129318502 774.237