Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2178g00006 ATGGCGAAGCTTAACCTCACTGACGTCGACCCAAACTCCGGCTTCTGCCCTTCGACCCGAACATTCCATAGCCTCCGCCCTGACTTCCCGGTTCCTCCTCCCTCTCAGCCTCTCTCCATCACCGACTTCGTATTCTCTCTCCTTCCTGCTGCCGCTTCATCCACCACCGTCCTCGTGGACTCCGTCACCGGCCACCACCTGTCCTACTCCCTCTTCCTTCACCAAGTCAAAAACCTCGCTGCCTCTCTCGCTTCCCTCACACCTCTTTCCAAAGGCCACGTCGCCTTCATTCTCTCCCCTTCCTCCCTCCACATTCCCGTTCTCTATTTCTCTCTCTTATCTCTGGGAGTCATCGTCTCACCCTCTAACCCGCTTTGCTCTGACTCGGAGGTGGCTCACCAGGTTCGACTCAGTCAACCCGTTATCGCATTCGCCACCTCTTCTACTGTCCACAAGATACCCAAACTTCAATACGGCACCGTATTGCTTGACTCCCCTCAGTTCGTTTCCATGATGATCAATGGACTTCCTGGAAGTGATAATAACAGGGGAACCGACAGAGTTGAGGTGAGTCAATCCGATACGGCGGCGATTCTCTACTCTTCGGGAACCACAGGCCGAGTCAAGGGAGCTTTGCTGACTCACAGGAATTTTATTTCAGTCATCAGTGGCCTCTATCACACGAGAAGCCAGAATATGAATGACGAAGAACGTCGCGTGTATTTGTTCCCATTGCCTCTGTTTCACGTTTTTGGGTTTTTCATGCTGCTTTCGTCCGTGGCAACGGGGGACACCATGGTTTTGATGCAGAGGTTCGATTTCGAAGGGATGCTGAAGGTTGTAGAGAGATACAGAATTACGAGCATGCCGGTGTCGCCGCCACTTGTGGTAGCGCTGACTAAGTCGGAGTTGGTAAACAAGTACGACCTTAGCTCGCTTCGAATTCTGGGGTGCGGCGGCGCTCCGCTTGGCAAGGAGGTGGCAGAAAACTTCAAAGTCAAATTTCCTAACGCAGAAATTGCCGAGGGCTATGGTTTGACTGAGAGCTCAGGTTTGGCAACGAGAATGATAGGGCCTGAAGAGACTAAGCGTCACGGTTCAGTGGGTCGACTGGAAAAGAATTTTGAAGCCAAAATAGTGGATCCTGTGTCTGGAGAAGCATTGCCTCCTGGCAAGAAAGGAGAATTATGGCTGCGAAGTCCTACAATTATGAAAGGTTATGTAGGAGATGAGGAGGCGACGGCTGGGACATTGGATTCAGAAGGATGGCTCAAGACTGGCGATCTTTGTTACTTTGACTCTGACGGCTTCCTCTTTATTGTCGACAGGTTAAAGGAACTCATTAAATACAAAGCATACCAGGTTCCCCCAGCTGAGTTGGAACTTGTACTTCTCTCCAACCCTGAAATTGCCGATGCTGCTGTAATTCCCTACCCAGATGAAGAAGCTGGGCAGATACCAATGGCCTTTCTGGTAAGAAAGTCTGGAAGCAATATTAGTGCATCTGAGGTCATGGATTTTGTGGCAAAGCAGGTGGCACCATACAAGAAAATAAGGCGGCTATCATTTGTGAACAGCATTCCAAAGTCTGCATCAGGCAAAATATTGAGAAGGGAACTAGTCTCTCATGCTCTCACTGCTGCTTCCTCCAAATTGTGA 1659 0.5015 MAKLNLTDVDPNSGFCPSTRTFHSLRPDFPVPPPSQPLSITDFVFSLLPAAASSTTVLVDSVTGHHLSYSLFLHQVKNLAASLASLTPLSKGHVAFILSPSSLHIPVLYFSLLSLGVIVSPSNPLCSDSEVAHQVRLSQPVIAFATSSTVHKIPKLQYGTVLLDSPQFVSMMINGLPGSDNNRGTDRVEVSQSDTAAILYSSGTTGRVKGALLTHRNFISVISGLYHTRSQNMNDEERRVYLFPLPLFHVFGFFMLLSSVATGDTMVLMQRFDFEGMLKVVERYRITSMPVSPPLVVALTKSELVNKYDLSSLRILGCGGAPLGKEVAENFKVKFPNAEIAEGYGLTESSGLATRMIGPEETKRHGSVGRLEKNFEAKIVDPVSGEALPPGKKGELWLRSPTIMKGYVGDEEATAGTLDSEGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELELVLLSNPEIADAAVIPYPDEEAGQIPMAFLVRKSGSNISASEVMDFVAKQVAPYKKIRRLSFVNSIPKSASGKILRRELVSHALTAASSKL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2178g00006 552 FunFam Long-chain-fatty-acid--CoA ligase FadD 26 445 - -
Pral2178g00006 552 SUPERFAMILY Acetyl-CoA synthetase-like 26 545 - -
Pral2178g00006 552 CDD 4CL 32 540 - -
Pral2178g00006 552 Gene3D - 22 445 IPR042099 -
Pral2178g00006 552 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Pral2178g00006 552 FunFam 4-coumarate--CoA ligase 2 446 547 - -
Pral2178g00006 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 542 - -
Pral2178g00006 552 Gene3D - 446 546 IPR045851 -
Pral2178g00006 552 Pfam AMP-binding enzyme 55 450 IPR000873 -
Pral2178g00006 552 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2178g00006 Pral-Chr2178 19140 22301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2178g00006 9 552 Monolignol Biosynthesis Gene Families AT5G63380 59.532 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2178g00006 K01904 - qsa:O6P43_022573 801.586