Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2178g00005 ATGGCGAACCCCGTCGATCCAAGCTCTGGCTTTTGCCCTCAAACCAGAACATTCCATAGTCTTCGTCCTGACGTCCCTCTCCCTCCTCCCTCTCAACCTCTCCACATCACCGACTACGCTCTCTCTCTCATTCCTCCCACCGCTTCTTCCACCACAGTCCTCATCGACTCCACCACCGACCGCCGTATCTCCTACTCCCTCTTTCTTCAACAAATCAAAAACCTCGCTTCCTCCCTCGCTTCCCTTACCCCTCTTTCCAAAGGCCACGTCGCGTTCATTCTCTCCCCTGCTTCTCTACACATCCCAGTTCTTTACTACTCCCTCCTGTCTTTAGGAGTCACCATCTCACCCGCCAACCCTATCGGCTCTGATTCGGAGGTCGCTCACCAGGTTGAGCTCGCTCAACCTGTCATCGCATTCGCTACCTCCTCCACTGCTCATAAGATCCCCAAGCTTCGATACGGTACCGTCATAATTGACTCGCCTCAGTTCCTTTCCATGATCAATGGAACTTCCGGAATTGGTAATGCTGATGACAGGGGCGTCCGAAGAGTTCAGATGAGCCAATCGGAGCCGGCGGCGATTCTCTTCTCGTCTGGAACAACCGGAAGAGTGAAAGGCGTGTTATTGACTCACAGGAATTTGATTGCCCTCATTGGGGGATTTTACCACCTGAGGCACCTGATGGATTCGCAAGAGAATGAATCCGATCCGGTGTCGCTATTCACGCTGCCACTTTTCCACGTGTTCGGGTTCTTCATGCTGATTAGGGCGATATATGGGGAGACTCTGGTTTTGATGCATAGGTTCGATTTCGAAGGGATGTTAAGAGCGGTAGAAAGGTACAAGATTTCGTACATGCCAGTTTCCCCGCCGCTCATTGTGGCGCTGGCTAAGTCCGAGTTAGTGAACAAGTACGACCTTAGCTCGCTGAAGTTGCTAGGATGCGGCGGGGCGCCGCTTGGCAAGGAGGTGGCCGAGAACTTCAGCGCCAGATTCCCTGACGTGGAAATAGTGCAGGGGTATGGTCTGACTGAAAGTGGAGGTGGGGCAACGAGAATGATAGGATCTGAAGAGGCTAAGCGACATGGCTCTGTAGGTCGACTTGCAGAGAATATGGAAGCCAAGATTGTGGATCCCGTGACCGGAGAGTCATTGCCTCCTGGTCAGAAAGGCGAGCTATGGTTGAAAGGTCCAACAATAATGAAAGGTTATGTAAAAAATGAGGAAGCAACGGCTGAGACATTGGATGCGGAGGGGTGGCTCAAGACTGGAGATCTTTGTTATTTTGATTCTGATGGCTTCCTCTACATTGTAGACAGGCTTAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTGGAACATGTACTTCACACACACCCTGAAATTGCTGATGCTGCCGTAATTCCGTACCCTGATGAAGAGGCAGGGCAGATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAGCAATATCAACGCAGATCAGGTTATGGACTTTGTGGCAAAGCAGGTTGCGCCGTACAAGAAGGTACGACGTGTAGCTTTCATTAATGCCATCCCCAAGAATCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTCAATTCTGTGCTATCAAGTGGTTCTTCCAAATTGTAA 1653 0.5033 MANPVDPSSGFCPQTRTFHSLRPDVPLPPPSQPLHITDYALSLIPPTASSTTVLIDSTTDRRISYSLFLQQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTISPANPIGSDSEVAHQVELAQPVIAFATSSTAHKIPKLRYGTVIIDSPQFLSMINGTSGIGNADDRGVRRVQMSQSEPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMDSQENESDPVSLFTLPLFHVFGFFMLIRAISXGETLVLMHRFDFEGMLRAVERYKISYMPVSPPLIVALAKSELVNKYDLSSLKLLGCGGAPLGKEVAENFSARFPDVEIVQGYGLTESGGGATRMIGSEEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQKGELWLKGPTIMKGYVKNEEATAETLDAEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHVLHTHPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNINADQVMDFVAKQVAPYKKVRRVAFINAIPKNPAGKILRRELVNSVLSSGSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2178g00005 551 Gene3D - 445 545 IPR045851 -
Pral2178g00005 551 CDD 4CL 28 539 - -
Pral2178g00005 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Pral2178g00005 551 Pfam AMP-binding enzyme 51 449 IPR000873 -
Pral2178g00005 551 SUPERFAMILY Acetyl-CoA synthetase-like 57 543 - -
Pral2178g00005 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Pral2178g00005 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Pral2178g00005 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Pral2178g00005 551 Gene3D - 20 444 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2178g00005 Pral-Chr2178 13883 16640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2178g00005 5 551 Monolignol Biosynthesis Gene Families AT5G63380 63.458 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2178g00005 K01904 - qsa:O6P43_022573 867.84