Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2176g00002 ATGCAAAAGTACATGGTTAGGACAGCGACAGGGCTTGGCTCTTCATGTGGAGCATGCAAGTTCCTCAGGAGAAAGTGTACTGCTGATTGCATATTTGCTCCTTACTTCTCCTATGATCAGGCTGCAACCCATTTTGCAGCAGTTCACAAGGTTTTTGGTGCTAGTAATGTCTCTAGGCTTCTGCTACACCTACCAGTGCAGAGCAGAAGTGATGCAGCCATCACTGTGTCCTACGAGGCACTCGCTCGGATGCATGATCCCGTATATGGTTGTGTTGCTCAAATCTTTGCCCTACAGCAACAGGTTGCAAGCTTACAAGATGAAATAGATAAACTTAGTAATATGATGGCCAACTCTCCTGTTGGTGCTGCCATTTCTGGTGGCAGTTCTCAAGCCTCAACAAGCAGAAACACAGATGGGATAGATTTTACTTGGCAGCAAGATGCATCAAATACACAACTTTATCATAATCAATTATCTACTCTGTTTTCTCACCAAGAAAGTGGTGTAGCCTACCAAGGCTTGGAAGGACAGGTGAATCTGGGTTTTCCAGATACTCTTCAATTTGAAGACCATGTATTTGATGAGTCCGACCCTAATTCATTAGAGAAGCTCCTATCAGGAATTGACCAACAGGTTTTCATCAATCATCCTTGA 657 0.4384 MQKYMVRTATGLGSSCGACKFLRRKCTADCIFAPYFSYDQAATHFAAVHKVFGASNVSRLLLHLPVQSRSDAAITVSYEALARMHDPVYGCVAQIFALQQQVASLQDEIDKLSNMMANSPVGAAISGGSSQASTSRNTDGIDFTWQQDASNTQLYHNQLSTLFSHQESGVAYQGLEGQVNLGFPDTLQFEDHVFDESDPNSLEKLLSGIDQQVFINHP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2176g00002 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 156 - -
Pral2176g00002 218 Coils Coil 95 115 - -
Pral2176g00002 218 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Pral2176g00002 218 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2176g00002 Pral-Chr2176 1752 2821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2176g00002 13 118 AS2 family AT5G06080 73.585 1.43e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral2176g00002 LOB 2.4e-35 No_clan