Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2161g00006 ATGAATGATTGGGGAAATGAAGCAGTTCGAATTCAAATAAGCTTAATAGTACTTGATATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTTCGACACAAGAATCTTCTTAGTCTGCGGGGCTATTGTGCTGAAGGACAGGAACGATTAATTGTGTATGACTATATGCCAAATTTGAGCTTACTCTCTCATCTTCATGGACAACACTCAGCAGAATGCCTTCTGAGTTGGAGCAGACGGATGAGTATTGCAATTGGATCAGCAGAGGGAATTGCATATCTCCACCACCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCAAGCAATGTGCTCTTGGATGCAGATTTCCAGGCTCAGGTTGCAGATTTTGGTTTTGCTAAATTGATCCCTGAGGGGGCAACACATGTGACTACAAGAGTTAAGGGTACCCTTGGTTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCCGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTTGCAACTGGCAGGAAACCAATTGAAAAACTGAGTGCGACAGTGAAGCGCTCGATAACCGAATGGGCATTACCGTTGGTTTTGGAGAAGAAATTTAGTGAAATTGTGGATTCAAGACTAAATGGTGACTATCTGGAGGAAGAGCTTAAAAGGGTTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTATTGAAGGGAGAATCTAAAGTTAAGTTTTCTCAGCTAGAGGATCATGAACTTTTCAGAAGCCCTCAACCTGCTGATTCCAACGACGATAGGATACAAGCTGCTGAAGATAGTTCTGACTTCATATCAGCAGAAAATGAATCAAAACCTGAGTTGAAGGAGAACCCTGAGCCATAA 969 0.42 MNDWGNEAVRIQISLIVLDIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLSWSRRMSIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPEGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPIEKLSATVKRSITEWALPLVLEKKFSEIVDSRLNGDYLEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESKVKFSQLEDHELFRSPQPADSNDDRIQAAEDSSDFISAENESKPELKENPEP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2161g00006 322 SUPERFAMILY Protein kinase-like (PK-like) 20 266 IPR011009 -
Pral2161g00006 322 PANTHER OS01G0253100 PROTEIN 20 271 - -
Pral2161g00006 322 MobiDBLite consensus disorder prediction 282 322 - -
Pral2161g00006 322 SMART serkin_6 6 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2161g00006 322 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2161g00006 322 Gene3D Phosphorylase Kinase; domain 1 16 71 - -
Pral2161g00006 322 Gene3D Transferase(Phosphotransferase) domain 1 72 283 - -
Pral2161g00006 322 Pfam Protein tyrosine and serine/threonine kinase 18 266 IPR001245 GO:0004672|GO:0006468
Pral2161g00006 322 FunFam PTI1-like tyrosine-protein kinase At3g15890 71 282 - -
Pral2161g00006 322 CDD STKc_IRAK 19 268 - -
Pral2161g00006 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2161g00006 Pral-Chr2161 45802 48300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2161g00006 20 272 Trihelix Transcription Factor Family AT1G70460 51.362 2.97e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pral2161g00006 PK_Tyr_Ser-Thr 5.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2161g00006 - - pcin:129289859 568.155