Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2161g00005 ATGGCTTTTTGCCCAATCTTTTGTTGTGGAAAGGGTTCGGATCGCAAAGCACGAGGGAAGGCACAACCAACATGGCGAGTCTTTTCCTTAAAGGAGCTACACTCAGCTACAAATAATTTCAATTATGATAATAAACTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTTCGACACAAGAATCTTCTTAGTCTGCGGGGCTATTGTGCTGAAGGACAGGAACGATTAATTGTGTATGACTATATGCCAAATTTGAGCTTACTCTCTCATCTTCATGGACAACACTCAGCAGAATGCCTTCTGAGTTGGAGCAGACGGATGAGTATTGCAATTGGATCAGCAGAGGGAATTGCATATCTCCACCACCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCAAGCAATGTGCTCTTGGATGCAGATTTCCAGGCTCAGGTTGCAGATTTTGGTTTTGCTAAATTGATCCCTGAGGGGGCAACACATGTGACTACAAGAGTTAAGGGTACCCTTGGTTATCTTGCACCTGAGTATGCTATGTTAGGTAAAGCATCCGAGAGTTGTGATGTCTACAGTTTTGGAATTCTCTTGCTGGAACTTGCAACTGGCAGGAAACCAATTGAAAAACTGAGTGCGACAGTGAAGCGCTCGATAACCGAATGGGCATTACCGTTGGTTTTGGAGAAGAAATTTAGTGAAATTGTGGATTCAAGACTAAATGGTGACTATCTGGAGGAAGAGCTTAAAAGGGTTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTATTGAAGGGAGAATCTAAAGTTAAGTTTTCTCAGCTAGAGGATCATGAACTTTTCAGAAGCCCTCAACCTGCTGATTCCAACGACGATAGGATACAAGCTGCTGAAGATAGTTCTGACTTCATATCAGCAGAAAATGAATCAAAACCTGAGTTGAAGGAGAACCCTGAGCCATAA 1104 0.4293 MAFCPIFCCGKGSDRKARGKAQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLSWSRRMSIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPEGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGRKPIEKLSATVKRSITEWALPLVLEKKFSEIVDSRLNGDYLEEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESKVKFSQLEDHELFRSPQPADSNDDRIQAAEDSSDFISAENESKPELKENPEP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2161g00005 367 PIRSF ILK 10 325 - -
Pral2161g00005 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Pral2161g00005 367 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Pral2161g00005 367 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Pral2161g00005 367 MobiDBLite consensus disorder prediction 326 367 - -
Pral2161g00005 367 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2161g00005 367 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2161g00005 367 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2161g00005 367 CDD STKc_IRAK 46 313 - -
Pral2161g00005 367 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Pral2161g00005 367 Gene3D Phosphorylase Kinase; domain 1 11 115 - -
Pral2161g00005 367 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Pral2161g00005 367 PANTHER OS01G0253100 PROTEIN 21 316 - -
Pral2161g00005 367 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2161g00005 Pral-Chr2161 45802 49264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2161g00005 28 317 Trihelix Transcription Factor Family AT1G70460 51.361 6.56e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pral2161g00005 Pkinase 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2161g00005 - - pcin:129289859 699.893