Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2160g00004 ATGGCAGAACTTCTTTTTGAGACTTATGGTGTTCCATCAATAGCGTTTGGGGTTGATGGAGCTTTCAGCTACAAGTATAATCAACACCATGGAGTTTGCAATAAAGATGGCCTTGCTATGTGTCCTGGATTTACCACAACCCATGTGATTCCGTTTGTAGACGGGGAACCTGTTTATAAAGGTTGCTGCCGTACAAATATTGGGGGCTTCCATGTAACTGATTATTTAAAGCAGCTTCTTTCACTTAAATATCCCTACCATCTGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTACATTGCACAGGATTATGCTTCTGAAGCTCGGCTGTTTCAGAGAGGAGGGAAGGAAGCTGAAGAGAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCACCAACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCAAGGAAGGCAGCAATTAGAGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCAAAGAGATCATCCAGAATAAATGAACTGGAAAATGAATTGCATGGCTTGGAATTTCTCTTACAGCAGCTTGGGCAAGTAGAGGAGAGTGACATTCCATCTTTCCTATCAGACACTGGCTATGTCTCTAAGCAGGAGATTGAATCTGCACGTGTCAAAGTTACACAATCTTTACGGAAAGCAAAAGGTGAACCAAAGAGTGAGCAAGCTGAAACTGAAAAGGCTGACTCTGCTAATAGCGAGAAGTATTCTCTTATAAACATCCCTGATGAAACACTAACCCCAGAACAGCTTATTGAAAAGAAGAAGCAGTTGTCACTCAAGTCCATGTCTGAAGGGCGGCAGCGATCAAAACAGAAACGTTATGAGGAGGAAATGCAACGAGAGAGGCGATTACAACTAGAGGAGGAGAAACGCCTAGAGAACCCAGAGCTTTACCTGGAGCAATTGCATGCTAAATACAAAAATCTATCGGAAAAAGTTGACCAACGAAAAAGACTTAAGACAAATGGAAACCACACAAATGGAAATAATTTGTCTGGTGGTGTTGGTCGTGGTGAGAGGCTAAATGCTGCCCAAAGGGAAAGAATGCGCCTTTTGACAACTGCAGCCTTTGATCGTGGTAAAGGTGAGGATACATTTGGTGCCAGAGATGAAGATTGGCAACTTTACAAATTGATGAGTAAGGATAATGACGATGATGATGAGGGACCGGATGAGGATGAGACAGAATTGGCCCGCATCTCTTCTAGGCTCCAGGATTTGGATCCTACATTTGTACCCAAGTTAGAAACTGGTAATGCACAATCTGCTGAGGTGGTGCCACGTTTTCGACCTCTCAGCAAAGAGGATTTTCAGATTGTTCTTGGTGTCGAAAGATTCAGATGTCCTGAGATTTTGTTCAATCCAAACTGGATTGGGGTTGATCAGGTAGGGTTAGACGAGATGGCCGGGGTCTCCATAAGGAGATTGCCAGATAAAGATGAAAGTCTGGAAGAGAGACTAACTGATTCCATACTTGTGACTGGTGGAAGTTCTGTGTTTCCTGGTATGATTGAACGCCTTGAAGCTGGGATTAGGATGATTAGACCCTGCGGATCGCCCATAAAAATAGTTAGAGCATTGGATCCAGTTTTGGATGCCTGGAGGGGCGCTTCTGCTTATGCCTCAGCTTCACTTTTTCATACACAAACTTTCAGTAGGACGGATTATTATGAAAAGGGTGAAGATTGGCTTCGCAGTTATCATCTCAGATACACATTATAG 1770 0.4367 MAELLFETYGVPSIAFGVDGAFSYKYNQHHGVCNKDGLAMCPGFTTTHVIPFVDGEPVYKGCCRTNIGGFHVTDYLKQLLSLKYPYHLARFTWEKVEDLKMEHCYIAQDYASEARLFQRGGKEAEEKTRCWQLPWVPPPTEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSRINELENELHGLEFLLQQLGQVEESDIPSFLSDTGYVSKQEIESARVKVTQSLRKAKGEPKSEQAETEKADSANSEKYSLINIPDETLTPEQLIEKKKQLSLKSMSEGRQRSKQKRYEEEMQRERRLQLEEEKRLENPELYLEQLHAKYKNLSEKVDQRKRLKTNGNHTNGNNLSGGVGRGERLNAAQRERMRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDNDDDDEGPDEDETELARISSRLQDLDPTFVPKLETGNAQSAEVVPRFRPLSKEDFQIVLGVERFRCPEILFNPNWIGVDQVGLDEMAGVSIRRLPDKDESLEERLTDSILVTGGSSVFPGMIERLEAGIRMIRPCGSPIKIVRALDPVLDAWRGASAYASASLFHTQTFSRTDYYEKGEDWLRSYHLRYTL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2160g00004 589 SMART actin_3 103 585 IPR004000 -
Pral2160g00004 589 PANTHER ACTIN 1 577 IPR004000 -
Pral2160g00004 589 FunFam Putative actin-related protein 5 549 577 - -
Pral2160g00004 589 SUPERFAMILY Actin-like ATPase domain 36 582 IPR043129 -
Pral2160g00004 589 Coils Coil 287 307 - -
Pral2160g00004 589 MobiDBLite consensus disorder prediction 270 294 - -
Pral2160g00004 589 Coils Coil 315 335 - -
Pral2160g00004 589 Gene3D - 1 96 - -
Pral2160g00004 589 MobiDBLite consensus disorder prediction 334 354 - -
Pral2160g00004 589 MobiDBLite consensus disorder prediction 225 246 - -
Pral2160g00004 589 Coils Coil 175 195 - -
Pral2160g00004 589 FunFam ARP5 actin-related protein 5 homolog 479 548 - -
Pral2160g00004 589 Gene3D - 455 544 - -
Pral2160g00004 589 FunFam Actin-related protein 5 69 123 - -
Pral2160g00004 589 Pfam Actin 1 229 IPR004000 -
Pral2160g00004 589 Pfam Actin 454 581 IPR004000 -
Pral2160g00004 589 MobiDBLite consensus disorder prediction 225 257 - -
Pral2160g00004 589 FunFam actin-related protein 5 18 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2160g00004 Pral-Chr2160 19521 23259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2160g00004 455 576 Cytoskeleton Gene Families AT5G09810 36.066 5.23e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2160g00004 K11672 - gmx:100808396 981.089