Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral215g00002 ATGGATGCCACCGCCCAAACAGGGAAAATATATGTCGCTGTGAGTAATGATCTTCAAGATGGAATCAAAACCTTGAATTGGGCTCTCAATAAATGGAAATCTTATCCTATTTCCATTGTTATTCTCTACGTGAGTCACAATACTTCCAAGGATCATGTTACTACCCCTTTTGGCAAACTCCCAGCAAGATCTGTGAACGATGAGATGCTACCAGCTCTCAGGAAACAAGAGCAAGAGAAAATCGACAAACTTCTTTCCAAGTACATATCTTTCTGTGGGAAGGTGCCAGCTGAAATACTTGAAGTCGACAAATTTGACGAACCTATTCAAAAACGTGTAGTAGACATGATTATTGGTCTAGAAATAACCAAACTCGTCATTGGATTTTCAGTGATGAAGCCCTCCTGGAAATCACGAGGTGCCATAAGCGGATTGTTCTATATTCATCAGCATAAGCCTGAATTCTGTGAACTGTTCATTTTATGCGGAGGGAAACAAGTATTCATGAGAGGACAGAACGATGAGAAGACCATGGAGGACGATAATGGGGTTGTGGTTGCCAGAATGAGAGACAAGATAACATTCAAAGATTGGTTAGATAAACTGTTGCCTGAGAGAAGCCATTTGGATTCCCCAGACTATCGTGGATCAGCAAATTCTTCATCAGCAAGTATGGAATCCCCAGGTTCACAGAACCAGTGGGAATTCTATCTCCAAGAGATTGAAACTTATTTCCAGGATTTGTTGTCTTCTCACATGAATGATGAACAATTGAGCCTTGAGCATCAAGACAGTGACGTCTCGCGGATTAGTGGAGTTGAGCCAGATGATGTCAGGGAACAGAACAATTCTAATATGAGAGGAGCGGAAAGAATTGAGATGTTGAAAAGAAAACTGGAGGAGGCACATAAGATGATCCAGCTGAAGAGGAAAGAAGCTAAGGATCAAAGTGATAGACATGCAAAAGCTGAATGGGCTATTTGTTTATGCAACGCTCGGGCTCAAGAACTTGAAGGCAAAATCAAGGAAGAGATCAACATGAAGGAGGAGTTAGCAAAAGAATTGGAAGCAGAAAAGGAAACCATATACGAAACCAGACGTGATATTGAAGAGAGCAGAAAGAGGTTAAGCTCACTGTTGGAGCTTCAATTGGAGCTCTCAAACAAGCTTCAGATCTCCACACAGGCAAGGTCACAAGCTGAAATTCAATTGGAGAATGCGGCGAATACCAGGTCGGAGATGGTGGCCGAGATCGACGAGCTTAGGAGACAAAGAGACGTGCTTTACAGAAGGATCGAGTTTTGCAAAGAAAAGGACGCCATCGGAATGGCGGCGAGGCTGACGGAACCCAGTTTGAATTTTAGAGAGTACACGGTCGACGAGATCAGGTTGGCCACCGACGACTTCTCCGACCGCCTCATGCTGAAGTCCGGTGGTGCCGACTGGACCAACGTTTATAGAGGAAAGATCAACCATTCCACCGTAGCCATCAAGATCCCCCCTTCCAATCATGCCTTGTCACCCCAAGAATTCCAAGCTCAGGTGAGACTTCTTGGGGCTATTCGGCATCCTCACGTGCTGGCGATGGTGGGATTTTGCAGTGAACTAAAATGCATAGTTTTGGAATATATGAATAATGGCAGCTTGAGGGACATGCTATTTTCCAGGAGAAGAAACCGAGCCTTACCATGGCAAGACCGAATCAGGATAGCCGCCGAAGTTTGTTCGGGCTTGGGCTTTCTTCATTCGGCCCAGCCCAAACCCTTCATCCATGGGCACCTGACGCCTTCCAGCATCCTTCTCGATCGCAACCTCGTTGCCAAGATCAAAGGTTTTGGGTCCAACGAAGGCAACCCACAATCTGATGTAAGGGCCTTTGGAGTTTTGATCATGCATTTGCTGACGGGAAGAAACTGGGTGGGCCTGGTTGAGGAGGAGATGAAGATGGGAGAATCTTTGATGAAGGTTTTGGATGAGACTGCTGGGCCGTGGCAGTTGAATGTGGCCCAAAAGCTAGCAGACTTAGCCTTGAAGTGCATGGGCTTTCCTAATGGGCCTAAGCCCAAGGAAGGGCTAAGCATCGGAAATGTAATGCTGGAACTAAATGAGATCAGAAGAGAGGCTAATGACGAAGGTGCTAGAGGAGACACAACAAGATTTAGCGGAGGTGTAGATAAAGAAGAGCTTATGGATGTGCCCAACGTGTTTCTTTGTCCCATACTTCAGGAGGTGATGAAGAATCCACACGTGGCAGCGGATGGGTTTTCATATGAATTAGAAGCAATAGAAGAGTGGGTGGGTTCAGGGCATGAGAGATCGCCAATGACAAACGCAAGGCTGCCTCACTTGTTTTTTACCCCTAATCACTCCCTTCGTTCCCTAATTCTGGACTGGCAAACCAAAAGATCTTCTCATTTTAAATAA 2424 0.455 MDATAQTGKIYVAVSNDLQDGIKTLNWALNKWKSYPISIVILYVSHNTSKDHVTTPFGKLPARSVNDEMLPALRKQEQEKIDKLLSKYISFCGKVPAEILEVDKFDEPIQKRVVDMIIGLEITKLVIGFSVMKPSWKSRGAISGLFYIHQHKPEFCELFILCGGKQVFMRGQNDEKTMEDDNGVVVARMRDKITFKDWLDKLLPERSHLDSPDYRGSANSSSASMESPGSQNQWEFYLQEIETYFQDLLSSHMNDEQLSLEHQDSDVSRISGVEPDDVREQNNSNMRGAERIEMLKRKLEEAHKMIQLKRKEAKDQSDRHAKAEWAICLCNARAQELEGKIKEEINMKEELAKELEAEKETIYETRRDIEESRKRLSSLLELQLELSNKLQISTQARSQAEIQLENAANTRSEMVAEIDELRRQRDVLYRRIEFCKEKDAIGMAARLTEPSLNFREYTVDEIRLATDDFSDRLMLKSGGADWTNVYRGKINHSTVAIKIPPSNHALSPQEFQAQVRLLGAIRHPHVLAMVGFCSELKCIVLEYMNNGSLRDMLFSRRRNRALPWQDRIRIAAEVCSGLGFLHSAQPKPFIHGHLTPSSILLDRNLVAKIKGFGSNEGNPQSDVRAFGVLIMHLLTGRNWVGLVEEEMKMGESLMKVLDETAGPWQLNVAQKLADLALKCMGFPNGPKPKEGLSIGNVMLELNEIRREANDEGARGDTTRFSGGVDKEELMDVPNVFLCPILQEVMKNPHVAADGFSYELEAIEEWVGSGHERSPMTNARLPHLFFTPNHSLRSLILDWQTKRSSHFK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral215g00002 807 Pfam Protein tyrosine and serine/threonine kinase 481 613 IPR001245 GO:0004672|GO:0006468
Pral215g00002 807 Coils Coil 397 438 - -
Pral215g00002 807 MobiDBLite consensus disorder prediction 210 229 - -
Pral215g00002 807 Coils Coil 292 316 - -
Pral215g00002 807 SMART Ubox_2 735 798 IPR003613 GO:0004842|GO:0016567
Pral215g00002 807 Gene3D Phosphorylase Kinase; domain 1 444 543 - -
Pral215g00002 807 MobiDBLite consensus disorder prediction 213 229 - -
Pral215g00002 807 ProSiteProfiles Protein kinase domain profile. 471 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral215g00002 807 PANTHER OS02G0152300 PROTEIN 10 796 - -
Pral215g00002 807 CDD RING-Ubox_WDSUB1-like 733 788 - -
Pral215g00002 807 Coils Coil 334 375 - -
Pral215g00002 807 SUPERFAMILY Protein kinase-like (PK-like) 451 681 IPR011009 -
Pral215g00002 807 SUPERFAMILY RING/U-box 726 803 - -
Pral215g00002 807 Gene3D Transferase(Phosphotransferase) domain 1 550 694 - -
Pral215g00002 807 Pfam U-box domain 732 802 IPR003613 GO:0004842|GO:0016567
Pral215g00002 807 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 730 807 IPR013083 -
Pral215g00002 807 ProSiteProfiles U-box domain profile. 731 805 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral215g00002 Pral-Chr215 8981 13671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral215g00002 1 805 U-box Gene Family AT5G65500 47.152 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral215g00002 PK_Tyr_Ser-Thr 3.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral215g00002 - - pcin:129299872 1124.38