Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2159g00003 ATGTGGGGCTTCTTCTTCCTCCTCTTAATTGCATTTGCTTCTTTCGGTTTCTTGATGCGCAAGCAAAGCCATGCCAGAAAGAAACAGACGCTGCCACCAGGTGAAATGGGGCTCCCATGGATCGGAGAAACCATGGAGTTTTTCAATGCACAGAAAAGAAACAAGTTGTTCGAGGACTTCGTGCAGCCTCGGATTCTGAAACATGGAAAGATCTTCAAAACAAGGCTCATGGGATCACCAACTGTGATAGTGAATGGATCAGAAGCCAACAAGTTCTTCCTGTCGAATGAGTTCAAGCTTGTGAAAAGCTCTTGGCCTTCGTCTTCGGTTCAGCTCATGGGGAAGGACTCAATCATGGAGAAAGACGGCGAAAGGCACCGATTCCTTCGTGGGGTTATAGTCTCAAGCTTTGCCCATTCTGGTCTTGAAACGCTGGTTTCAAAGATCTGCAGCTCAGTTCAGCTTCATATTTCCAGAAACTGGCATGGCCGAGAAACGGTTCACCTGTACAGATCAGCCAAAGTTCTTACTTTCAACGTAGTGTTCGAGTGTTTAATGGGGATGAGGGTGGATTCAGAGATGCTGAACGCGTTCGATAGGGTTTTAGGGGGAGTGTTCTCACCAGCAGTTAAAGTTCCTGGTTCTAGGTTTTGGAGAGCGAAGAAGGCGAGGGAGGAGATCGAGAAGATGATGGGCAATGTGGTGAGGGAGAAGAAGAAGGAGATAATAGAAGGAAGGTTGAAGAAAGAGGAAGAAGGGATGCTTCTGAGTAAACTTGTGTGTGGGATCATTAAAGGAGAGATCACTGAACAAGAAGCTGTGGACAACGTGGTTCTGCTAGTTTTTGCAGCTCACGATACAACTTCTTTCGCCGTTGCTATGACCTTCAAGATGCTTGCCCACCATCCTGACTGCTACACCAAGCTCCTTCAAGAACATGAAGATATAAGGAAGAAGAAAACGAGGGGTGAGAAGTTGACAGTGGAAGACGTAAAGCAGATGAAATATTCATGGCAAGTTGCGAGAGAAAGCATGAGATTGCACCCTCCTATCTTCGGCTCCTTCAGGAAGACAATTGCTGACATTGATTATGAAGGCTTCACAATACCCAAAGGATGGAAGGTGCTATGGACAGCATATGGGACACACTACAATGAAGAGTATTTTAAGGATGCAACAAGGTTCAAGCCAAGTAGGTTTGAGGAGGATGAGGCAACCAAAATACCACCGTATGCATTTGTTCCATTTGGAGGAGGACCAAGACTTTGTGCTGGTTACCAGCTGGCTAAGCTCAATATTCTGATCTTTCTCCATTATGTAGTCACTCAATTTGATTGGTCCTTACTTCATCCTCATGAGCCTATCACTTTAGATCCCTTGCCCTTCCCTTCTCTTGGATTGCCCATCAAAATCTCTCCCAGGATCTCCCTCACTACTCCTTCACAACTTTGA 1452 0.4573 MWGFFFLLLIAFASFGFLMRKQSHARKKQTLPPGEMGLPWIGETMEFFNAQKRNKLFEDFVQPRILKHGKIFKTRLMGSPTVIVNGSEANKFFLSNEFKLVKSSWPSSSVQLMGKDSIMEKDGERHRFLRGVIVSSFAHSGLETLVSKICSSVQLHISRNWHGRETVHLYRSAKVLTFNVVFECLMGMRVDSEMLNAFDRVLGGVFSPAVKVPGSRFWRAKKAREEIEKMMGNVVREKKKEIIEGRLKKEEEGMLLSKLVCGIIKGEITEQEAVDNVVLLVFAAHDTTSFAVAMTFKMLAHHPDCYTKLLQEHEDIRKKKTRGEKLTVEDVKQMKYSWQVARESMRLHPPIFGSFRKTIADIDYEGFTIPKGWKVLWTAYGTHYNEEYFKDATRFKPSRFEEDEATKIPPYAFVPFGGGPRLCAGYQLAKLNILIFLHYVVTQFDWSLLHPHEPITLDPLPFPSLGLPIKISPRISLTTPSQL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2159g00003 483 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 Gene3D Cytochrome P450 20 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 SUPERFAMILY Cytochrome P450 26 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 Coils Coil 220 240 - -
Pral2159g00003 483 PANTHER CYTOCHROME P450 26 27 459 - -
Pral2159g00003 483 FunFam Taxadiene 5-alpha hydroxylase 22 474 - -
Pral2159g00003 483 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2159g00003 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Pral2159g00003 483 CDD CYP90-like 64 473 - -
Pral2159g00003 483 Pfam Cytochrome P450 32 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2159g00003 Pral-Chr2159 13209 15709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2159g00003 5 375 Cytochrome P450 AT2G42850 60.743 2.45e-153 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2159g00003 - - gmx:100793336 709.138