Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2159g00001 ATGCCTAGTGTTTCCTTTCTCTTCTTTCTCCTTTACCTAACCCTAATTTCTCATCATGGCACTATCGCCCAGATAGGCTTCGTAAAAAGTTTCTGTGGTGAAGGCCCCACCGACAGCAATAGTTCCTTCCGATCCAACCTCAGAAACCTTTTACTAAACATGTCTTTCAACACACAAATCGACTATGGTTTCTACAACTTCTCCTCCGGCAACAACTCCGACAAAGTTTACGTCATCGGACTATGCCGAGGAGACATTACTGTACAAGATTGCCGCAATTGCATCCAAGATTCAAGGGTGATTATTCTCCAAGTGTGTGCACCTAATGCGAGGGAAGCAATCGGGTGGTACGACATGTGCTTTTTGCGATACTCAAACCGATCGATATTTGGTGTGATGGAAACATCGCCGGGTTACAATTCGTTATTAGACAGCTCTGACGCTTTGGAGAAAGACGAGTTCAAGAATGTGTTGATGCAGATGATGAGTTATCTGAGAGAAAAGGCTGCTTCCGGAGACTCGCTTCGAAAGTTTGCGGTGGCGAATGCTAGTGGTCCGGGCAATCAAACCATATACGGTCTTGCACAGTGCACGCCAGACTTGTCAAACAAAGATTGTGACATTTGCTTGAGGAGGGCAATCTCTGATATCTCTAAATGTTGTGACGGAAAGAGAGGTGGTCGGGTGGTCCAACCTAGTTGCAACATTAGATTCGGACCTGATAGCGTCGGACCCAATAGCGTCTTTGACGCTTCTGCGTACAATAATACACAACCATTCGTGCAGTCACCGTTGCCTCATCCCGCCTCCAAACAAGGAAAGAGAAACAAGTCATCAAGGATTGTTACTGCCGCGGTTGTTGCCTTCACCGCAGGACTCACCTTACTCATCTTCATCGTTGTAATATATTTAAAACCAAGAAGGAGACCCAATAAAATTGGAACTGAAGCTAAGGATGCTGCCGACTCATTGCAAATGGACTTTGAAACCATCAGAATGGCAACAAATGATTTTGCTGATGCAAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTTGGGTAGGCTGTGTAATGGACAAGAGATTGCTGTAAAAAGGTTGAGCAGGAATTCTGGGCAAGGTGATGTGGAGTTTAAGAATGAAGTGTTGCTAATGGCCAAGCTACAGCATCGGAATTTAGTCAAGCTACTTGGTTTTTGTCATAAGAAAGAAGAAAGGCTTCTTGTTTATGAGTTCCTTCCTAACAAAAGCCTTGATTACTTCATTTTTGACCCAATCAAGAGATCATATTTAAATTGGCAAAAACGTGTCAAAATCATAGAAGGCATTTCTCGAGGTCTTCTTTATCTCCATCAAGATTCTCGAGTACGGATCATTCACCGTGATTTGAAGCCAAACAATATACTTTTAGATGAAGACATGGATGCTAAGATCTCAGATTTTGGTATGGCAAGGTTATTTGCAATCGATCAAACTCAAAGCAACACAAGTAAATTGCTGGGACTTAGTAATGGATACATGGCACCAGAATATGTAAAACATGGAATCTTTTCAACAAAATCAGATGTTTTTAGTTTTGGAGTATTGGTTTTAGAAATTATAAGTGGCCAAAAGAATGGTGAATTCCACAATGAGGAGACCATAGAGCATATAGGAACTGTTGCTTGGAAGAGTTGGAGAAAAGGAATATTGGCAAATATTGTAGATCCAACATTATTGATTGAAGAAGGAGACTCTTCAAGAAATAAAATGATGAGATGCATCCAAATAGGGTTACTGTGCCTTCAAGTAAACACAGCTCATAGGCCATCAATGGCTTCCATTGTTACGTTGCTAAGTAGCTCTTCCTGTCCCATCCCAGTTCCTTCAGAACCATCCTTTTATAATTGGACAAGCATGCCAAGCATTGATATTCCATCATCATTATCTGGAGATCAATCTGTTGAAGAATCAAGAAATGAACTTACTTTTAGCGAGCAATTTCCTCGCTAG 1995 0.4155 MPSVSFLFFLLYLTLISHHGTIAQIGFVKSFCGEGPTDSNSSFRSNLRNLLLNMSFNTQIDYGFYNFSSGNNSDKVYVIGLCRGDITVQDCRNCIQDSRVIILQVCAPNAREAIGWYDMCFLRYSNRSIFGVMETSPGYNSLLDSSDALEKDEFKNVLMQMMSYLREKAASGDSLRKFAVANASGPGNQTIYGLAQCTPDLSNKDCDICLRRAISDISKCCDGKRGGRVVQPSCNIRFGPDSVGPNSVFDASAYNNTQPFVQSPLPHPASKQGKRNKSSRIVTAAVVAFTAGLTLLIFIVVIYLKPRRRPNKIGTEAKDAADSLQMDFETIRMATNDFADANKLGQGGFGAVYLGRLCNGQEIAVKRLSRNSGQGDVEFKNEVLLMAKLQHRNLVKLLGFCHKKEERLLVYEFLPNKSLDYFIFDPIKRSYLNWQKRVKIIEGISRGLLYLHQDSRVRIIHRDLKPNNILLDEDMDAKISDFGMARLFAIDQTQSNTSKLLGLSNGYMAPEYVKHGIFSTKSDVFSFGVLVLEIISGQKNGEFHNEETIEHIGTVAWKSWRKGILANIVDPTLLIEEGDSSRNKMMRCIQIGLLCLQVNTAHRPSMASIVTLLSSSSCPIPVPSEPSFYNWTSMPSIDIPSSLSGDQSVEESRNELTFSEQFPR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2159g00001 664 Gene3D - 24 128 IPR038408 -
Pral2159g00001 664 Gene3D - 139 242 IPR038408 -
Pral2159g00001 664 CDD STKc_IRAK 344 613 - -
Pral2159g00001 664 ProSiteProfiles Protein kinase domain profile. 338 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2159g00001 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pral2159g00001 664 FunFam Cysteine-rich receptor-like protein kinase 10 139 242 - -
Pral2159g00001 664 ProSiteProfiles Gnk2-homologous domain profile. 25 129 IPR002902 -
Pral2159g00001 664 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Pral2159g00001 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 656 - -
Pral2159g00001 664 FunFam Cysteine-rich receptor-like protein kinase 10 305 413 - -
Pral2159g00001 664 SUPERFAMILY Protein kinase-like (PK-like) 325 635 IPR011009 -
Pral2159g00001 664 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 129 - -
Pral2159g00001 664 MobiDBLite consensus disorder prediction 641 664 - -
Pral2159g00001 664 Gene3D Phosphorylase Kinase; domain 1 303 413 - -
Pral2159g00001 664 Pfam Protein tyrosine and serine/threonine kinase 342 611 IPR001245 GO:0004672|GO:0006468
Pral2159g00001 664 Pfam Salt stress response/antifungal 151 238 IPR002902 -
Pral2159g00001 664 Pfam Salt stress response/antifungal 37 126 IPR002902 -
Pral2159g00001 664 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Pral2159g00001 664 FunFam cysteine-rich receptor-like protein kinase 10 414 620 - -
Pral2159g00001 664 Gene3D Transferase(Phosphotransferase) domain 1 414 618 - -
Pral2159g00001 664 SMART serkin_6 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2159g00001 Pral-Chr2159 3690 7595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2159g00001 7 664 Receptor kinase-like Gene Family AT4G21410 43.668 8.00e-177 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2159g00001 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2159g00001 - - gmx:113000773 661.759