Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2157g00008 ATGTCAGCTACTGTTGTTGAGGGGAATGATGCAGTCACTGGCCACATAATATCCACCACCATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGAATTGTTGGAACCGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAATCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGATTGATGGATCATCCAAATGTGATTTCTCTTAAGCACTGTTTCTTCTCTACAACTAGCAGAGACGAACTTTTTCTGAACTTGGTTATGGAATATGTACCTGAGACAATGTATCGAGTTCTAAAACACTATAGTAGTATGAACCAGAGGATGCCCCTCATCTATGTGAAACTTTACACATACCAAATCTTTAGGGGACTGGCATATATCCATACTGTACCGGGAGTTTGCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACACACCAAGTGAAGCTTTGTGATTTTGGGAGTGCTAAAGTTTTGGTAAAGGGTGAATCAAACATTTCCTACATATGTTCACGTTACTATCGAGCTCCGGAACTAATATTTGGTGCGACAGAATACACAACTTCAATTGATATCTGGTCAGCTGGTTGCGTCCTTGCCGAACTTCTTCTAGGCCAGGTTCGTATCATTACTCATGCTGAAGAAGCGCCCCTCCTAATCCCTTTTCAGTTAGTCATTTGTAGTTGCTTATGGTTTCGAATGTTTCTTCAGCCATTGTTTCCAGGAGACAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTAGCCCAACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCACAAATTAAAGCTCACCCTTGGCACAAGGTTTTTCATAAGCGAATGCCACCTGAAGCGATTGACCTTACTTCAAGGCTTCTCCAATATTCACCTAGTTTTCGATGTACTGCGCTGCAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAACCTAATGCCAGACTGCCTAATGGCCGCCCGCTGCCCCCGCTTTTCAACTTTAAACAGGAACTGTCCGGAGCATCACCTGAACTGATCAGCAAGCTCATCCCAGAGCATGTCAGGCGGCAGAGCATTCTGGGCTTCCAGATTCCACCTGGTACATAG 1218 0.4401 MSATVVEGNDAVTGHIISTTIGGKNGEPKQTISYMAERIVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQVRIITHAEEAPLLIPFQLVICSCLWFRMFLQPLFPGDNQVDQLVEIIKVLGSPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLTSRLLQYSPSFRCTALQACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISKLIPEHVRRQSILGFQIPPGT 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2157g00008 405 ProSiteProfiles Protein kinase domain profile. 34 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2157g00008 405 Gene3D Phosphorylase Kinase; domain 1 19 113 - -
Pral2157g00008 405 Pfam Protein kinase domain 34 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2157g00008 405 Gene3D Transferase(Phosphotransferase) domain 1 114 392 - -
Pral2157g00008 405 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 2 394 - -
Pral2157g00008 405 FunFam Glycogen synthase kinase-3 beta 18 113 - -
Pral2157g00008 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Pral2157g00008 405 SUPERFAMILY Protein kinase-like (PK-like) 33 376 IPR011009 -
Pral2157g00008 405 SMART serkin_6 34 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2157g00008 405 CDD STKc_GSK3 29 352 IPR039192 -
Pral2157g00008 405 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2157g00008 Pral-Chr2157 25204 35447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2157g00008 38 387 MAP Kinase Gene Family AT3G59790 32.055 1.63e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pral2157g00008 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2157g00008 K14502 - qsu:111995841 712.22