Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2157g00007 ATGGAGACCGATAAGGAAATGTCAGCTACTGTTGTTGAGGGGAATGATGCAGTCACTGGCCACATAATATCCACCACCATTGGAGGCAAAAATGGGGAACCTAAACAGACCATCAGTTACATGGCAGAACGAATTGTTGGAACCGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAATCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGGTACAAGAATCGTGAACTGCAGTTAATGCGATTGATGGATCATCCAAATGTGATTTCTCTTAAGCACTGTTTCTTCTCTACAACTAGCAGAGACGAACTTTTTCTGAACTTGGTTATGGAATATGTACCTGAGACAATGTATCGAGTTCTAAAACACTATAGTAGTATGAACCAGAGGATGCCCCTCATCTATGTGAAACTTTACACATACCAAATCTTTAGGGGACTGGCATATATCCATACTGTACCGGGAGTTTGCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACACACCAAGTGAAGCTTTGTGATTTTGGGAGTGCTAAAGTTTTGGTAAAGGGTGAATCAAACATTTCCTACATATGTTCACGTTACTATCGAGCTCCGGAACTAATATTTGGTGCGACAGAATACACAACTTCAATTGATATCTGGTCAGCTGGTTGCGTCCTTGCCGAACTTCTTCTAGGCCAGGTTCGTATCATTACTCATGCTGAAGAAGCGCCCCTCCTAATCCCTTTTCAGTTAGTCATTTGTAGTTGCTTATGGTTTCGAATGTTTCTTCAGCCATTGTTTCCAGGAGACAATCAGGTGGACCAACTTGTGGAAATCATCAAGGTTCTTGGTAGCCCAACTCGAGAAGAAATTCGTTGCATGAACCCAAATTATACAGATTTTAGATTTCCACAAATTAAAGCTCACCCTTGGCACAAGGTTTTTCATAAGCGAATGCCACCTGAAGCGATTGACCTTACTTCAAGGCTTCTCCAATATTCACCTAGTTTTCGATGTACTGCGCTGCAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAACCTAATGCCAGACTGCCTAATGGCCGCCCGCTGCCCCCGCTTTTCAACTTTAAACAGGAACTGTCCGGAGCATCACCTGAACTGATCAGCAAGCTCATCCCAGAGCATGTCAGGCGGCAGAGCATTCTGGGCTTCCAGATTCCACCTGGTACATAG 1236 0.4401 METDKEMSATVVEGNDAVTGHIISTTIGGKNGEPKQTISYMAERIVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQVRIITHAEEAPLLIPFQLVICSCLWFRMFLQPLFPGDNQVDQLVEIIKVLGSPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLTSRLLQYSPSFRCTALQACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELISKLIPEHVRRQSILGFQIPPGT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2157g00007 411 Gene3D Transferase(Phosphotransferase) domain 1 120 398 - -
Pral2157g00007 411 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Pral2157g00007 411 CDD STKc_GSK3 35 358 IPR039192 -
Pral2157g00007 411 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Pral2157g00007 411 ProSiteProfiles Protein kinase domain profile. 40 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2157g00007 411 Pfam Protein kinase domain 40 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2157g00007 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pral2157g00007 411 SMART serkin_6 40 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2157g00007 411 FunFam Glycogen synthase kinase-3 beta 24 119 - -
Pral2157g00007 411 SUPERFAMILY Protein kinase-like (PK-like) 39 382 IPR011009 -
Pral2157g00007 411 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 5 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2157g00007 Pral-Chr2157 25204 35703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2157g00007 44 393 MAP Kinase Gene Family AT3G59790 32.055 1.68e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pral2157g00007 Pkinase 1.1e-51 CL0016