Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2157g00002 ATGGCTACAAATGGTGGGGATCTTTCTCCCTCTGAAGGTTCAAGCATCTCAGGAGGGTCCAAAGGAAAAGCTATCAGAGAAGTGATCGAACACCAGAAGATGAAGATGGTTCAAATCACTCATGAAGACTCTCTTCATAAGCCGAAGATCAAACTGGATACGTTCAAATTTGGATTGAACATCGCAGGTTGTTCTTCATCTAAAATAGACATCAACAACGACAAAGGAAAAGATCATGAACGTCATTGTCATCACGATGAACCTGATCATTATGATAAAAGAACACAGAAGACTTTCTGCTGCAACTTCTGCAAAAGAGAGTTTTCTTCCTCACAAGCCTTAGGAGGCCATCAAAATGCCCACAAACAAGAGCGTGCAATCGCTAAACAACGACAAGTAGGGATTATCTCTGACCATCATTTCAGTGTTCTAGGGCGTCACTATTCTCCACACTTTCCTCATTATAGTAATTACCCCTATTATGCTAATTACCCTCAGATTAATTATGGGTCTTTCAGTTGTAATAATAGACCACTTGGGGTTAAATTGGAGTCCATGATTCATAAGTCGCCTCAGAAGTCTAGTTTTATATTTAGGCGTGATCATCAAACCCCAGGCAGGCTTAGGGCAAGTTCAGGAACTTTGAGGATTGAAGAAATTGGTAATATCAGTCCTCTGACTCGGCAATTCGAGCATATTTCTTCTGCTCCAGCTGCTACCGATAGTGCAATTGGTGATCAACATATCAAGGTTTTGCCACAGAAAGCTTTGAAAGAGGAGGACGATAATCTTGATACTTCAGGCCTTGACTTGTCACTTAAGCTTTAA 828 0.4094 MATNGGDLSPSEGSSISGGSKGKAIREVIEHQKMKMVQITHEDSLHKPKIKLDTFKFGLNIAGCSSSKIDINNDKGKDHERHCHHDEPDHYDKRTQKTFCCNFCKREFSSSQALGGHQNAHKQERAIAKQRQVGIISDHHFSVLGRHYSPHFPHYSNYPYYANYPQINYGSFSCNNRPLGVKLESMIHKSPQKSSFIFRRDHQTPGRLRASSGTLRIEEIGNISPLTRQFEHISSAPAATDSAIGDQHIKVLPQKALKEEDDNLDTSGLDLSLKL 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral2157g00002 275 ProSitePatterns Zinc finger C2H2 type domain signature. 100 121 IPR013087 -
Pral2157g00002 275 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Pral2157g00002 275 Pfam C2H2-type zinc finger 99 123 - -
Pral2157g00002 275 MobiDBLite consensus disorder prediction 1 18 - -
Pral2157g00002 275 MobiDBLite consensus disorder prediction 1 23 - -
Pral2157g00002 275 SUPERFAMILY beta-beta-alpha zinc fingers 96 127 IPR036236 -
Pral2157g00002 275 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 275 IPR044246 GO:0009788
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral2157g00002 Pral-Chr2157 2851 4774 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2157g00002 29 189 C2H2 Transcription Factor Family AT5G10970 31.902 7.50e-14 68.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2157g00002 - - pcin:129316645 252.292