Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2157g00002 | ATGGCTACAAATGGTGGGGATCTTTCTCCCTCTGAAGGTTCAAGCATCTCAGGAGGGTCCAAAGGAAAAGCTATCAGAGAAGTGATCGAACACCAGAAGATGAAGATGGTTCAAATCACTCATGAAGACTCTCTTCATAAGCCGAAGATCAAACTGGATACGTTCAAATTTGGATTGAACATCGCAGGTTGTTCTTCATCTAAAATAGACATCAACAACGACAAAGGAAAAGATCATGAACGTCATTGTCATCACGATGAACCTGATCATTATGATAAAAGAACACAGAAGACTTTCTGCTGCAACTTCTGCAAAAGAGAGTTTTCTTCCTCACAAGCCTTAGGAGGCCATCAAAATGCCCACAAACAAGAGCGTGCAATCGCTAAACAACGACAAGTAGGGATTATCTCTGACCATCATTTCAGTGTTCTAGGGCGTCACTATTCTCCACACTTTCCTCATTATAGTAATTACCCCTATTATGCTAATTACCCTCAGATTAATTATGGGTCTTTCAGTTGTAATAATAGACCACTTGGGGTTAAATTGGAGTCCATGATTCATAAGTCGCCTCAGAAGTCTAGTTTTATATTTAGGCGTGATCATCAAACCCCAGGCAGGCTTAGGGCAAGTTCAGGAACTTTGAGGATTGAAGAAATTGGTAATATCAGTCCTCTGACTCGGCAATTCGAGCATATTTCTTCTGCTCCAGCTGCTACCGATAGTGCAATTGGTGATCAACATATCAAGGTTTTGCCACAGAAAGCTTTGAAAGAGGAGGACGATAATCTTGATACTTCAGGCCTTGACTTGTCACTTAAGCTTTAA | 828 | 0.4094 | MATNGGDLSPSEGSSISGGSKGKAIREVIEHQKMKMVQITHEDSLHKPKIKLDTFKFGLNIAGCSSSKIDINNDKGKDHERHCHHDEPDHYDKRTQKTFCCNFCKREFSSSQALGGHQNAHKQERAIAKQRQVGIISDHHFSVLGRHYSPHFPHYSNYPYYANYPQINYGSFSCNNRPLGVKLESMIHKSPQKSSFIFRRDHQTPGRLRASSGTLRIEEIGNISPLTRQFEHISSAPAATDSAIGDQHIKVLPQKALKEEDDNLDTSGLDLSLKL | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2157g00002 | 275 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 100 | 121 | IPR013087 | - | |
Pral2157g00002 | 275 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 99 | 126 | IPR013087 | - | |
Pral2157g00002 | 275 | Pfam | C2H2-type zinc finger | 99 | 123 | - | - | |
Pral2157g00002 | 275 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Pral2157g00002 | 275 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Pral2157g00002 | 275 | SUPERFAMILY | beta-beta-alpha zinc fingers | 96 | 127 | IPR036236 | - | |
Pral2157g00002 | 275 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 9 | 275 | IPR044246 | GO:0009788 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2157g00002 | Pral-Chr2157 | 2851 | 4774 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2157g00002 | 29 | 189 | C2H2 Transcription Factor Family | AT5G10970 | 31.902 | 7.50e-14 | 68.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2157g00002 | - | - | pcin:129316645 | 252.292 |