LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2155g00002	ATGAGGCTCTTCTCCTTTCTCTTCTTTCTCCTTGACCTAACGCTAACGTCTCATCAGGGCACTGATGCCCAATCAAACTTCTTAAAATTCAACTGTACTGGGACTACTGATGATAGCAACAGTACCTTTCAGACCAATCTCAAAAACCTTTTGATGAATATCTCCAACACGCAAATCGACTATGGCTTCTACAACTTCTCCTCCGGCAGTAAATCCGACAGGGTTAACGCCATCGCACTCTGCCGAGGAGATGTTAAGGAACCAGATTGTCGCAGTTGTCTCGCAGATGCAAGGATTACTCTTCTCCAGGTTTGCCCTAACGTGAAGGAGGCGATCGGCTGGTACGATAACTGCTTCCTGCGATATTCCAACCGAACCATATTCGGTCTCATGGAAACATCGCCATATTTCTACCGGTCGGACACACATGATGTGTTGAAGAAAGACCAGTTCAAGAGCGTGGTGACGAAGATGATGAATCTTTTAAGAGACAGGGCTTCTTCCGGCAACTCTGTTCGGAAGTTCGCGGTGGCGAATGCGACAGGTCCGAGCAATCAGACGATATATGGTCTGGTACAGTGCACGCCAGACTTGTCACAGAACGCTTGCAGAGCTTGCTTGAATGGAGCAATCTCGGAAATTCCGAAATGTTGCAATGGAATGAAAGGTGGCGAAGTGTTGCGACCCAGTTGCAGCATTGTATATGAGACTTACCTCTTCTTTGATCCTGCGGCTGCACAACCATTCATATCATTACAGTCGCCGCCGTCTCCTCTTTCGCCAATTGCTCCTCCGACGGCACCCAAGAAAGGAAAGAGAAACGCAACAGGAATTGTTGTTGCCATAGTTGTGTCAACTGTTGCGTTCGTCGCACTGGTCATCTTCGTTGTTATCATTAAAGCCAGGAGGTTGAAGAACACTATTCGAAATACTTGCGCTGCCATGCGTAACGTAGCCGGAGAAGATGAAGATGAAATCATGACCGTTGAGTCATTGCAAATGGACTTTGAAACCATCAGAGCGGCAACGAATGATTTTTCTGAGGCAAATAAGCTTGGACAGGGTGGATTCGGACCTGTTTACTTGGGTAGGTTATATAATGGACAAGAGATCGCTGTAAAAAGGTTGAGTAGAGATTCTGGGCAAGGTGAAATGGAGTTTAAGAATGAAGTGTTGCTGGTGGCCAAGCTACAGCATCGGAATTTAGTGAGGTTACTTGGTTTTTGTCTCGAAAAAGAAGAAAAGCTCCTTATTTACGAGTTTGTTCCCAACAAAAGCCTTGACTGCTGCATCTTTGATTCCGTCAAAAGGGTGAAATTGAATTGGGAAAAGCGCTACAAAATCATAGAAGGCATTGCCAAAGGCCTTGTATACCTTCATCATGATTCTCGAATAAGAATTGTTCATCGTGATGTCAAAGCAGGCAACGTGCTCTTAGATGAAAAGATGAATGCTAAAATATCAGACTTTGGTATGGCAAGATTATTTGTGGTAGATCAAACTGAAGCCAAGACAAGTACAGTTGTTGGGACCCATGGATACATGGCACCAGAATACATGATGAATGGAACGTTTTCAACTAAATCAGACGTCTTCAGTTTTGGAGTATTGGTTTTAGAAATTATAAGTGGCCAGAAAAACTGTCGATTTCAGAATGGAGAAAATGAGGAGCACGTAGTAAGTGCGGTTTGGAAAAACTGGACAAAAGGGACATTGGCAAATATTGTGGATCCAACGTTGATGGAGGATGCTGGGTCAAGAAGTGAAATAATGAGATGCATCCACATAGGGTTACTGTGTGTTCAAGAAAATGCAGAACACAGGCCAACAATGGCTTCCATTGTTCCAATGCTGAGTATTCATTCCATCACTCTTCCTGTTCCTTCAGAACCTTCATTTTATATCTGGAAAAGCTTACCAGGAATCAAATCAGCCGGATCAGTAAATCAGCTTTCAGTTTCAGAGCAATATCCTCGGTAG	1980	0.4399	MRLFSFLFFLLDLTLTSHQGTDAQSNFLKFNCTGTTDDSNSTFQTNLKNLLMNISNTQIDYGFYNFSSGSKSDRVNAIALCRGDVKEPDCRSCLADARITLLQVCPNVKEAIGWYDNCFLRYSNRTIFGLMETSPYFYRSDTHDVLKKDQFKSVVTKMMNLLRDRASSGNSVRKFAVANATGPSNQTIYGLVQCTPDLSQNACRACLNGAISEIPKCCNGMKGGEVLRPSCSIVYETYLFFDPAAAQPFISLQSPPSPLSPIAPPTAPKKGKRNATGIVVAIVVSTVAFVALVIFVVIIKARRLKNTIRNTCAAMRNVAGEDEDEIMTVESLQMDFETIRAATNDFSEANKLGQGGFGPVYLGRLYNGQEIAVKRLSRDSGQGEMEFKNEVLLVAKLQHRNLVRLLGFCLEKEEKLLIYEFVPNKSLDCCIFDSVKRVKLNWEKRYKIIEGIAKGLVYLHHDSRIRIVHRDVKAGNVLLDEKMNAKISDFGMARLFVVDQTEAKTSTVVGTHGYMAPEYMMNGTFSTKSDVFSFGVLVLEIISGQKNCRFQNGENEEHVVSAVWKNWTKGTLANIVDPTLMEDAGSRSEIMRCIHIGLLCVQENAEHRPTMASIVPMLSIHSITLPVPSEPSFYIWKSLPGIKSAGSVNQLSVSEQYPR	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2155g00002	659	FunFam	Cysteine-rich receptor-like protein kinase 10	135	240	-	-
	Pral2155g00002	659	Gene3D	Transferase(Phosphotransferase) domain 1	422	624	-	-
	Pral2155g00002	659	Pfam	Protein tyrosine and serine/threonine kinase	349	617	IPR001245	GO:0004672\|GO:0006468
	Pral2155g00002	659	ProSiteProfiles	Gnk2-homologous domain profile.	133	240	IPR002902	-
	Pral2155g00002	659	Pfam	Salt stress response/antifungal	32	124	IPR002902	-
	Pral2155g00002	659	Pfam	Salt stress response/antifungal	148	238	IPR002902	-
	Pral2155g00002	659	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	467	479	IPR008271	GO:0004672\|GO:0006468
	Pral2155g00002	659	FunFam	Cysteine-rich receptor-like protein kinase 10	309	421	-	-
	Pral2155g00002	659	FunFam	cysteine-rich receptor-like protein kinase 10	422	625	-	-
	Pral2155g00002	659	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 10	25	127	-	-
	Pral2155g00002	659	Gene3D	-	24	126	IPR038408	-
	Pral2155g00002	659	Gene3D	-	135	240	IPR038408	-
	Pral2155g00002	659	SMART	serkin_6	346	599	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2155g00002	659	SUPERFAMILY	Protein kinase-like (PK-like)	328	621	IPR011009	-
	Pral2155g00002	659	Gene3D	Phosphorylase Kinase; domain 1	308	421	-	-
	Pral2155g00002	659	ProSiteProfiles	Gnk2-homologous domain profile.	25	127	IPR002902	-
	Pral2155g00002	659	ProSiteProfiles	Protein kinase domain profile.	346	598	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2155g00002	659	CDD	STKc_IRAK	352	618	-	-
	Pral2155g00002	659	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	21	639	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2155g00002	Pral-Chr2155	20249	23476	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2155g00002	3	659	Receptor kinase-like Gene Family	AT4G21410	44.526	0.0	549

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral2155g00002		PK_Tyr_Ser-Thr	1.1e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2155g00002	-		-	gmx:113000773	712.99