Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00111 ATGGCGAGAAGCATATCAGATTGTGGGTCATCAGGAAGTGAAGAAGAGACGGGGATACGGAAAGGGCCGTGGACAGAGGAAGAGGATGCTATTCTGGCTGACTACATCTCGCTCCATGGCGAAGGACACTGGAACTCTCTCGCCCGCTGCGCAGGCATGTCTGAAGCGAACGGGAAAAGCTGCAGATTGAGATGGCTGAACTACCTGCGTCCTGGCGTCCGGCGCGGCGACATAACCCTCCAAGAACAGCTCTTAATTCTCGATCTCCATTCCCGGTGGGGCAATAGGTGGTCGAAAATAGCGCAAGAATTGCCTGGGAGAACGGACAATGAGATAAAGAACTATTGGAGGACACGAGTGGTGAAGCAGGCGAAGCAAATGAAATGTGAAGTGAATAGCAAACAGTTTAGAGACGCCTTGCGTTTCGTATGGATTCCTCGCCTGGTAGAGCGCATCCAAGCCTCATCGTCTCAAACAGCATCGCCCTGCCACTACTACTCCCTCACCGCATCATACAGGCTACTTCTCTGTCTGATCAGTCAGGGGTCAGTGGTGACGACGACACCTCCTCTCGTCTCTCGTTCTGCAGAAAAGGAAGCCTGCAGTTCAGGGAACCATCACTCGGATTATTCGCCATTAGAATTCCAAGCATTTGAAGAAGACAATGTTGATTTCTGGACCTACGAAAACATATGCTTCTTGCGACAACAGCTTGCCGATGCATGA 726 0.5124 MARSISDCGSSGSEEETGIRKGPWTEEEDAILADYISLHGEGHWNSLARCAGMSEANGKSCRLRWLNYLRPGVRRGDITLQEQLLILDLHSRWGNRWSKIAQELPGRTDNEIKNYWRTRVVKQAKQMKCEVNSKQFRDALRFVWIPRLVERIQASSSQTASPCHYYSLTASYRLLLCLISQGSVVTTTPPLVSRSAEKEACSSGNHHSDYSPLEFQAFEEDNVDFWTYENICFLRQQLADA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00111 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Pral2150g00111 241 Gene3D - 21 74 - -
Pral2150g00111 241 SMART sant 20 71 IPR001005 -
Pral2150g00111 241 SMART sant 74 122 IPR001005 -
Pral2150g00111 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 69 IPR017930 -
Pral2150g00111 241 Gene3D - 79 140 - -
Pral2150g00111 241 ProSiteProfiles Myb-like domain profile. 16 69 IPR001005 -
Pral2150g00111 241 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 188 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral2150g00111 241 Pfam Myb-like DNA-binding domain 21 69 IPR001005 -
Pral2150g00111 241 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Pral2150g00111 241 FunFam MYB transcription factor 79 142 - -
Pral2150g00111 241 SUPERFAMILY Homeodomain-like 18 116 IPR009057 -
Pral2150g00111 241 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Pral2150g00111 241 MobiDBLite consensus disorder prediction 1 23 - -
Pral2150g00111 241 CDD SANT 23 69 IPR001005 -
Pral2150g00111 241 CDD SANT 79 118 IPR001005 -
Pral2150g00111 241 FunFam Myb transcription factor 21 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00111 Pral-Chr2150 509888 511040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00111 19 165 MYB Transcription Factor Family AT1G48000 70.748 1.60e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2150g00111 Myb_DNA-binding 6.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00111 K09422 - gmx:100819467 273.863