Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00101 ATGGTGGCCGAAGCAGACCTTATGCGTCAACAGAGCACCCCTGCGTTGGATGTTCAGTGTTTTCCTAATGGAACAAATATATGTGAGATCGATGATGCCGGTGCCGCCACGCCTCCGAGTTTTGACCGTGTTCGTGCTTCTCCATTGGCGTCTGCGGAGTTACTCAGCTCACAAGAAGATATTAAAGCTGCAGAAGGAATATCAAATACTGCTGTTGATCCTGCTGTTCTTCATTTTGTCCCCAGCATCCGTTCTGGCAGTTTTGCTGACATTGGCCCCCGGAGATACATGGAAGATGAACATATAGTGATAGATGATTTGTCTTCTCACATGGGATCACTATATACATTTCCTGAACCAAGTGCCTTCTATGGGGTATTTGATGGTCATGGAGGACCTGAAGCTGCGACTTATATCCAGAAGAATCTAATGAGATTCTTCTTTGAAGATGTTAGCTTCCCCCAGGGATCTGAAGTTGATAATGTTTTTCTACAAGAGGCAGAGAACTCCCTCAGAAAATCATTTCTTTTGGCTGACTTAGCTTTGGCTGATGATTGCAGTGTGAGCAACTCATCAGGGACCACGGCTCTTACTGCCTTCATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGATTGCCGAGCAGTTCTCTGTCGTAAAGGAAAGGCAATTGACATGTCTCAAGATCACAGGCCTATTTATCCTTCAGAGCGGAGGCGGGTTGAGGAATTAGGCGGTCGTGTAGATGATGGTTATCTTAATGGGGTTTTGTCAGTTTCTCGAGCCCTTGGGGACTGGGATATGAAGTTTCCTCGTGGTTCTCCCTCGCCTTTGATTGCGGAGCCTGAGTTTCGTCAAGTGGTTCTGACAGAGGATGATGAGTTCCTCATCATAGGTTGTGATGGAATTTGGGATGTCATGACAAGTCAGCAGGCAGTCAACCTTGTTCGTAGAAGCCTGAGGAGGCATTATGACCCAGAGCGCTGTGCCAGGGACCTGGTCATGGAGGCACTACGCCTTAATACGTTTGATAATCTCACAGTGATTGTTGTGTGCTTCTCTTCTAATTCTATTGATCCCAGGGAGCCATCCCCTCCTCGTCAGAGGAAATTGAGGTGCTTTAGCCTTTCTGCAGAGGCGCTTTGTAGCTTGAAGAACTTGTTGGAAGGCAGTGCAAGTAATTGA 1188 0.4705 MVAEADLMRQQSTPALDVQCFPNGTNICEIDDAGAATPPSFDRVRASPLASAELLSSQEDIKAAEGISNTAVDPAVLHFVPSIRSGSFADIGPRRYMEDEHIVIDDLSSHMGSLYTFPEPSAFYGVFDGHGGPEAATYIQKNLMRFFFEDVSFPQGSEVDNVFLQEAENSLRKSFLLADLALADDCSVSNSSGTTALTAFIFGRLLMVANAGDCRAVLCRKGKAIDMSQDHRPIYPSERRRVEELGGRVDDGYLNGVLSVSRALGDWDMKFPRGSPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMTSQQAVNLVRRSLRRHYDPERCARDLVMEALRLNTFDNLTVIVVCFSSNSIDPREPSPPRQRKLRCFSLSAEALCSLKNLLEGSASN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00101 395 SMART PP2C_SIG_2 99 354 IPR001932 -
Pral2150g00101 395 SUPERFAMILY PP2C-like 77 355 IPR036457 -
Pral2150g00101 395 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Pral2150g00101 395 FunFam Probable protein phosphatase 2C 22 68 357 - -
Pral2150g00101 395 Gene3D - 78 360 IPR036457 -
Pral2150g00101 395 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Pral2150g00101 395 SMART PP2C_4 74 352 IPR001932 -
Pral2150g00101 395 Pfam Protein phosphatase 2C 94 346 IPR001932 -
Pral2150g00101 395 CDD PP2Cc 83 354 IPR001932 -
Pral2150g00101 395 PANTHER PROTEIN PHOSPHATASE 2C 75 352 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00101 Pral-Chr2150 454305 457269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00101 97 391 PP2C-type Phosphatase Gene Family AT3G62260 69.257 9.87e-151 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Pral2150g00101 PP2C 1.6e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00101 K14803 - gmx:100785388 609.372