Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2150g00089 | ATGGGTGAGAATGGCTTGGATGGCGATGCGACTGGGCATGGCAAGGCAACCGCATCAGAGAATCAGGCAGAAACCAGCACAAAAGAGGAAAACAGAGAGATGGCCAAGCAAAAAGGAAAGGCCGACACAGTTCCATTTCACAGGCTGTTCTCATTTGCGGATTCTACTGATACTCTGTTAATGATCGTTGGCACCATTGGGGCCATTGGAAATGGTATGGGTTTGCCTTTCATGACGTTACTGATGGGCCAAATGATCAATGTTTTCGGAAGTAACCAGCAAAGCACAGACACTGTTGCACAAGTTGCCAAGGTTTCTTTGAAATTTGTGTACTTGGCAATTGGAAGTGGTGTGGCAGCATGTCTTCAGGTGTCTTGCTGGATGGTCACGGGGGAAAGACAGGCTGCGAGAATAAGGGGATTGTATCTGAAAACCATACTAAGACAAGACGTTACTTTCTTCGATAAGGAAACAAACACCGGAGAGGTGGTAGGGAGAATGTCGGGTGATACTGTTCTCATACAGGATGCCATGGGAGAGAAGGTTGGGAAATTTCTGCAGTTAGTTTCAACATTCATTGGCGGCTTCGTGGTCGCATTTGTTAAAGGATGGCTTCTTGCACTCGTCATGATGGCCATTCTTCCATTGCTAGTGGTGGCCGGGGCATCCATGGCCTTCATCATAGGAAGGATGGCTTCCCGTGGTCAAACAGCTTATGCAAAAGCAGCAAATGTCGTCGAACAAACTCTGGGCTCTATTAGAACTGTTGCATCCTTCACAGGCGAAAAGCAAGCAGTGGCTAGGTACAGCAAATTTCTTGTGGATGCTTACAAATCAGGAGTCCACGAAGGTTTTGTAGCCGGCCTGGGTTTCGGCACGGTTATGTTTGTCTTTTTCTGTGGTTATGGTTTGGCTGTATGGTTCGGCGCAAAGATGATATTGGAAAGAGGATACAACGGCGGTACGGTGATCAATGTGATTGTCGCTATATTAACCGCTTCCATGTCTCTTGGGCAGGCCACCCCTTGCTTGAGTGCTTTTGCTGCTGGTCAAGCCGCAGCTTATAAAATGTTCGAGACAATAAAGAGAAAGCCAGCGATAGACGCCTATGATCCAAGCGGTAAAACATTCGAGGATATTAATGGCGACATAGAGTTGAAGGATGTTTACTTTAGTTATCCGACAAGACCCGAGGAGCTAATATTCAATGGATTCTCTCTTCATATACCAAGTGGCACCACTTCTGCCCTGGTTGGAGAGAGTGGAAGTGGGAAGTCGACAGTTATCAGCTTAATAGAAAGATTCTATGATCCGCAGGCAGGTGAAGTTCTTATTGATGGCATCAACTTGAAAGAACTTCAGCTGAGATGGATTAGACGTAAAATCGGCCTCGTCAGCCAGGAGCCCGTCTTGTTTGCATCTAGCATTAAGGATAACATCTTATATGGAAAGGAGGGGGCAACGATTGAAGAAGTAAGAGCTGCAGCTGAACTTGCAAATGCTGCTAAGTTCATTGACAAATTGCCACAGGGATACGACACAATGGTTGGTGAGCATGGAACTCAACTATCTGGTGGACAGAAACAGCGTATTGCTATTGCCAGAGCAATTATAAAAGATCCAAGAATACTTCTTCTAGATGAAGCGACGAGTGCTCTAGACGCAGAATCTGAAAGGATAGTTCAAGAGGCTCTAGATAGGGTCATGGTCAACCGCACTACTGTTATTGTGGCTCATCGACTGAGCACAGTAAGGAATGCCGATATGATTGCTGTGATTCATAGAGGAAAGATGGTTGAAAAAGGAACGCATTCAGAGTTGCTCAGGGATCCCGAGGGAGCTTACTCTCAGCTTATACGCTTGCAAGAAGTAAACAGAGAGTCAGAGGAACCTTCAGAGCGTCAAAATAAAGGCGAAATTTCCATGGAATCGTTCAGACAATCGAGCCAAAGGAGGTCACTTCGGAGATCCATCAGTCGAGGATCATCTATCGGCAATAGTAGCAGGCACTCATTTTCAGTACCATTTGGGATGCCCACTGTAGTTAACGTCCCCGAACCTGAACTTGAAAAATTAGACGCGAAAAAAGAATTGCCAGCTGTTCCAATCCGTCGCCTTGCTTCCCTCAACAAGCCCGAAATTCCAGTGCTTCTGCTTGGATGTGTGGTTGCCATAATAAATGGCGCAATTCTTCCGGTGTTTGGTCTGTTGATTTCCTCTGTTATTAAAACATTCTACGAGCCACCTCATGAGATGAAAAAAGATTCCAAGTTTTGGGCACTTATTTTTTTGGCCCTTGGCATTGCTTCTCTGCTCGCAATTCCATCCCGAGGATACTTGTTTTCTGTAGCTGGCTCTAAGTTAATCCAACGCATCAGACTGATGTGTTTTGAGAGGGTTGTGAACATGGAGGTCGGTTGGTTTGATGAGCCAGAGCACTCAAGTGGAGTAATAGGTGCAAGGCTTTCGGCTGATGCTTCGACCGTGAGAGCCCTTGTCGGTGATGCGCTAGGTCTTCTGATTCAAAATATAGCATCAACGTTGACCGGTTTAATTATTGCTTTCGTTGCGAGCTGGGAGTTAGCTTTGGTTATTCTGGTACTTATTCCCCTGATTGGGGTGAATGGATATGTCCAAATGAAATTCATGAAGGGTTTTAGTGCAGATGCAAAGATGATGTACGAAGACGCAAGCCAAGTAGCTAATGATGCTGTTGGAAGCATCAGAACAGTAGCTTCTTTCTGCGCCGAAGAAAAGGTAATGGAACTGTATAGGAGGAAATGCGAAGGCCCCATGAAATCTGGGATACGGCTAGGCCTGATCAGTGGAACAGGATTTGGGTGTTCGTATTTCTTACTTTTTAGCGTCTACGCATCAAGTTTCTATGCCGGAGCTAGACTTGTGGATGCTGGCAGAACTACATTCTCTGACGTTTTTCGGGTTTTCTTTGCTCTGACAATGGCGGCAATGGCGGTTTCCCAGTCGAGCTCGATGGCTCCAGATTCTAGCAAAGCCAAGTCAGCCACTTCTTCCATATTTGAACTAATTGACAGGAAGTCCAAAGTAGACTCCAGCGACGAGTCTGGCGCCACATTGGATATCGTGAAGGGGGAAATTGAGCTTCGTCACGTGAGCTTCAAATATCCGTCTAGGCCAGATGTACAAATTTTCCGAGACCTCAGTTTGGCTATTCATTCGGGCAAGACAGTGGCCCTTGTTGGTGAGAGTGGAAGCGGGAAGTCGACAGTGATCGCATTGCTGCAAAGATTTTATGACCCAGACTCAGGCGAGATCACGCTTGATGGAATAGAACTCCGAACGTTTCAGATCAAGTGGTTAAGACAGCAGATGGGGCTGGTGAGCCAGGAGCCAGTGTTATTCAATGACACCATCCGTGCCAATATTGCTTACGGAAAAGGAGGCGATGCAACGGAAGCGGAAATCATAGCCGCTGCGGAACTAGCCAACGCTCATAAGTTCATTAGTGGCTTGCACCATGGTTATGACGCGGTGGTGGGGGAGAGAGGACTGCAGTTATCAGGGGGCCAGAAACAAAGGGTGGCCATAGCACGTGCCATAATAAAGAGTCCAAAGATATTACTGCTAGATGAGGCCACGAGTGCGTTGGATGCAGAGTCGGAGCGAGTAGTTCAGGATGCATTAGACAGAGTAATGGTGAACAGGACTACGGTGGTCGTGGCACATCGGCTATCCACCATAAAGAATGCGGATGTGATTGCGGTGGTCAAGAACGGAGTGATAGTGGAGAAAGGAAAGCATGAGACGTTGATTAACATTAAAGACGGCTTCTATGCCTCCCTAGTCCAGCTTCATACCAGTGCTTCCACTGTATGA | 3855 | 0.4669 | MGENGLDGDATGHGKATASENQAETSTKEENREMAKQKGKADTVPFHRLFSFADSTDTLLMIVGTIGAIGNGMGLPFMTLLMGQMINVFGSNQQSTDTVAQVAKVSLKFVYLAIGSGVAACLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLVSTFIGGFVVAFVKGWLLALVMMAILPLLVVAGASMAFIIGRMASRGQTAYAKAANVVEQTLGSIRTVASFTGEKQAVARYSKFLVDAYKSGVHEGFVAGLGFGTVMFVFFCGYGLAVWFGAKMILERGYNGGTVINVIVAILTASMSLGQATPCLSAFAAGQAAAYKMFETIKRKPAIDAYDPSGKTFEDINGDIELKDVYFSYPTRPEELIFNGFSLHIPSGTTSALVGESGSGKSTVISLIERFYDPQAGEVLIDGINLKELQLRWIRRKIGLVSQEPVLFASSIKDNILYGKEGATIEEVRAAAELANAAKFIDKLPQGYDTMVGEHGTQLSGGQKQRIAIARAIIKDPRILLLDEATSALDAESERIVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLRDPEGAYSQLIRLQEVNRESEEPSERQNKGEISMESFRQSSQRRSLRRSISRGSSIGNSSRHSFSVPFGMPTVVNVPEPELEKLDAKKELPAVPIRRLASLNKPEIPVLLLGCVVAIINGAILPVFGLLISSVIKTFYEPPHEMKKDSKFWALIFLALGIASLLAIPSRGYLFSVAGSKLIQRIRLMCFERVVNMEVGWFDEPEHSSGVIGARLSADASTVRALVGDALGLLIQNIASTLTGLIIAFVASWELALVILVLIPLIGVNGYVQMKFMKGFSADAKMMYEDASQVANDAVGSIRTVASFCAEEKVMELYRRKCEGPMKSGIRLGLISGTGFGCSYFLLFSVYASSFYAGARLVDAGRTTFSDVFRVFFALTMAAMAVSQSSSMAPDSSKAKSATSSIFELIDRKSKVDSSDESGATLDIVKGEIELRHVSFKYPSRPDVQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGIELRTFQIKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISGLHHGYDAVVGERGLQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGFYASLVQLHTSASTV | 1284 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2150g00089 | 1284 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1039 | 1276 | IPR003439 | GO:0005524 | |
Pral2150g00089 | 1284 | SMART | AAA_5 | 411 | 603 | IPR003593 | GO:0016887 | |
Pral2150g00089 | 1284 | SMART | AAA_5 | 1066 | 1239 | IPR003593 | GO:0016887 | |
Pral2150g00089 | 1284 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 61 | 345 | - | - | |
Pral2150g00089 | 1284 | SUPERFAMILY | ABC transporter transmembrane region | 699 | 1019 | IPR036640 | GO:0005524|GO:0016020 | |
Pral2150g00089 | 1284 | FunFam | ABC transporter B family member 1 | 374 | 623 | - | - | |
Pral2150g00089 | 1284 | Pfam | ABC transporter | 1058 | 1207 | IPR003439 | GO:0005524 | |
Pral2150g00089 | 1284 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1030 | 1277 | IPR027417 | - | |
Pral2150g00089 | 1284 | FunFam | ABC transporter B family member 9 | 48 | 380 | - | - | |
Pral2150g00089 | 1284 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 718 | 1004 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pral2150g00089 | 1284 | ProSitePatterns | ABC transporters family signature. | 1179 | 1193 | IPR017871 | GO:0005524|GO:0016887 | |
Pral2150g00089 | 1284 | MobiDBLite | consensus disorder prediction | 623 | 640 | - | - | |
Pral2150g00089 | 1284 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 384 | 620 | IPR003439 | GO:0005524 | |
Pral2150g00089 | 1284 | PANTHER | ABC TRANSPORTER B FAMILY | 20 | 625 | IPR039421 | - | |
Pral2150g00089 | 1284 | MobiDBLite | consensus disorder prediction | 622 | 671 | - | - | |
Pral2150g00089 | 1284 | Pfam | ABC transporter transmembrane region | 717 | 990 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pral2150g00089 | 1284 | Pfam | ABC transporter transmembrane region | 61 | 335 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pral2150g00089 | 1284 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 707 | 1022 | - | - | |
Pral2150g00089 | 1284 | SUPERFAMILY | ABC transporter transmembrane region | 47 | 368 | IPR036640 | GO:0005524|GO:0016020 | |
Pral2150g00089 | 1284 | Gene3D | - | 382 | 639 | IPR027417 | - | |
Pral2150g00089 | 1284 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 375 | 622 | IPR027417 | - | |
Pral2150g00089 | 1284 | Gene3D | - | 1030 | 1283 | IPR027417 | - | |
Pral2150g00089 | 1284 | MobiDBLite | consensus disorder prediction | 641 | 671 | - | - | |
Pral2150g00089 | 1284 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 62 | 349 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Pral2150g00089 | 1284 | MobiDBLite | consensus disorder prediction | 25 | 40 | - | - | |
Pral2150g00089 | 1284 | FunFam | ABC transporter B family member 1 | 697 | 1005 | - | - | |
Pral2150g00089 | 1284 | CDD | ABC_MTABC3_MDL1_MDL2 | 1039 | 1277 | - | - | |
Pral2150g00089 | 1284 | ProSitePatterns | ABC transporters family signature. | 523 | 537 | IPR017871 | GO:0005524|GO:0016887 | |
Pral2150g00089 | 1284 | FunFam | ABC transporter B family member 1 | 1029 | 1279 | - | - | |
Pral2150g00089 | 1284 | CDD | ABC_MTABC3_MDL1_MDL2 | 384 | 622 | - | - | |
Pral2150g00089 | 1284 | Gene3D | ABC transporter type 1, transmembrane domain | 107 | 1013 | IPR036640 | GO:0005524|GO:0016020 | |
Pral2150g00089 | 1284 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
Pral2150g00089 | 1284 | Pfam | ABC transporter | 403 | 551 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2150g00089 | Pral-Chr2150 | 387024 | 393300 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2150g00089 | 37 | 1278 | Calmodulin-binding Proteins | AT2G36910 | 45.107 | 0.0 | 1071 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2150g00089 | K05658 | - | gmx:100777909 | 2026.52 |