Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00089 ATGGGTGAGAATGGCTTGGATGGCGATGCGACTGGGCATGGCAAGGCAACCGCATCAGAGAATCAGGCAGAAACCAGCACAAAAGAGGAAAACAGAGAGATGGCCAAGCAAAAAGGAAAGGCCGACACAGTTCCATTTCACAGGCTGTTCTCATTTGCGGATTCTACTGATACTCTGTTAATGATCGTTGGCACCATTGGGGCCATTGGAAATGGTATGGGTTTGCCTTTCATGACGTTACTGATGGGCCAAATGATCAATGTTTTCGGAAGTAACCAGCAAAGCACAGACACTGTTGCACAAGTTGCCAAGGTTTCTTTGAAATTTGTGTACTTGGCAATTGGAAGTGGTGTGGCAGCATGTCTTCAGGTGTCTTGCTGGATGGTCACGGGGGAAAGACAGGCTGCGAGAATAAGGGGATTGTATCTGAAAACCATACTAAGACAAGACGTTACTTTCTTCGATAAGGAAACAAACACCGGAGAGGTGGTAGGGAGAATGTCGGGTGATACTGTTCTCATACAGGATGCCATGGGAGAGAAGGTTGGGAAATTTCTGCAGTTAGTTTCAACATTCATTGGCGGCTTCGTGGTCGCATTTGTTAAAGGATGGCTTCTTGCACTCGTCATGATGGCCATTCTTCCATTGCTAGTGGTGGCCGGGGCATCCATGGCCTTCATCATAGGAAGGATGGCTTCCCGTGGTCAAACAGCTTATGCAAAAGCAGCAAATGTCGTCGAACAAACTCTGGGCTCTATTAGAACTGTTGCATCCTTCACAGGCGAAAAGCAAGCAGTGGCTAGGTACAGCAAATTTCTTGTGGATGCTTACAAATCAGGAGTCCACGAAGGTTTTGTAGCCGGCCTGGGTTTCGGCACGGTTATGTTTGTCTTTTTCTGTGGTTATGGTTTGGCTGTATGGTTCGGCGCAAAGATGATATTGGAAAGAGGATACAACGGCGGTACGGTGATCAATGTGATTGTCGCTATATTAACCGCTTCCATGTCTCTTGGGCAGGCCACCCCTTGCTTGAGTGCTTTTGCTGCTGGTCAAGCCGCAGCTTATAAAATGTTCGAGACAATAAAGAGAAAGCCAGCGATAGACGCCTATGATCCAAGCGGTAAAACATTCGAGGATATTAATGGCGACATAGAGTTGAAGGATGTTTACTTTAGTTATCCGACAAGACCCGAGGAGCTAATATTCAATGGATTCTCTCTTCATATACCAAGTGGCACCACTTCTGCCCTGGTTGGAGAGAGTGGAAGTGGGAAGTCGACAGTTATCAGCTTAATAGAAAGATTCTATGATCCGCAGGCAGGTGAAGTTCTTATTGATGGCATCAACTTGAAAGAACTTCAGCTGAGATGGATTAGACGTAAAATCGGCCTCGTCAGCCAGGAGCCCGTCTTGTTTGCATCTAGCATTAAGGATAACATCTTATATGGAAAGGAGGGGGCAACGATTGAAGAAGTAAGAGCTGCAGCTGAACTTGCAAATGCTGCTAAGTTCATTGACAAATTGCCACAGGGATACGACACAATGGTTGGTGAGCATGGAACTCAACTATCTGGTGGACAGAAACAGCGTATTGCTATTGCCAGAGCAATTATAAAAGATCCAAGAATACTTCTTCTAGATGAAGCGACGAGTGCTCTAGACGCAGAATCTGAAAGGATAGTTCAAGAGGCTCTAGATAGGGTCATGGTCAACCGCACTACTGTTATTGTGGCTCATCGACTGAGCACAGTAAGGAATGCCGATATGATTGCTGTGATTCATAGAGGAAAGATGGTTGAAAAAGGAACGCATTCAGAGTTGCTCAGGGATCCCGAGGGAGCTTACTCTCAGCTTATACGCTTGCAAGAAGTAAACAGAGAGTCAGAGGAACCTTCAGAGCGTCAAAATAAAGGCGAAATTTCCATGGAATCGTTCAGACAATCGAGCCAAAGGAGGTCACTTCGGAGATCCATCAGTCGAGGATCATCTATCGGCAATAGTAGCAGGCACTCATTTTCAGTACCATTTGGGATGCCCACTGTAGTTAACGTCCCCGAACCTGAACTTGAAAAATTAGACGCGAAAAAAGAATTGCCAGCTGTTCCAATCCGTCGCCTTGCTTCCCTCAACAAGCCCGAAATTCCAGTGCTTCTGCTTGGATGTGTGGTTGCCATAATAAATGGCGCAATTCTTCCGGTGTTTGGTCTGTTGATTTCCTCTGTTATTAAAACATTCTACGAGCCACCTCATGAGATGAAAAAAGATTCCAAGTTTTGGGCACTTATTTTTTTGGCCCTTGGCATTGCTTCTCTGCTCGCAATTCCATCCCGAGGATACTTGTTTTCTGTAGCTGGCTCTAAGTTAATCCAACGCATCAGACTGATGTGTTTTGAGAGGGTTGTGAACATGGAGGTCGGTTGGTTTGATGAGCCAGAGCACTCAAGTGGAGTAATAGGTGCAAGGCTTTCGGCTGATGCTTCGACCGTGAGAGCCCTTGTCGGTGATGCGCTAGGTCTTCTGATTCAAAATATAGCATCAACGTTGACCGGTTTAATTATTGCTTTCGTTGCGAGCTGGGAGTTAGCTTTGGTTATTCTGGTACTTATTCCCCTGATTGGGGTGAATGGATATGTCCAAATGAAATTCATGAAGGGTTTTAGTGCAGATGCAAAGATGATGTACGAAGACGCAAGCCAAGTAGCTAATGATGCTGTTGGAAGCATCAGAACAGTAGCTTCTTTCTGCGCCGAAGAAAAGGTAATGGAACTGTATAGGAGGAAATGCGAAGGCCCCATGAAATCTGGGATACGGCTAGGCCTGATCAGTGGAACAGGATTTGGGTGTTCGTATTTCTTACTTTTTAGCGTCTACGCATCAAGTTTCTATGCCGGAGCTAGACTTGTGGATGCTGGCAGAACTACATTCTCTGACGTTTTTCGGGTTTTCTTTGCTCTGACAATGGCGGCAATGGCGGTTTCCCAGTCGAGCTCGATGGCTCCAGATTCTAGCAAAGCCAAGTCAGCCACTTCTTCCATATTTGAACTAATTGACAGGAAGTCCAAAGTAGACTCCAGCGACGAGTCTGGCGCCACATTGGATATCGTGAAGGGGGAAATTGAGCTTCGTCACGTGAGCTTCAAATATCCGTCTAGGCCAGATGTACAAATTTTCCGAGACCTCAGTTTGGCTATTCATTCGGGCAAGACAGTGGCCCTTGTTGGTGAGAGTGGAAGCGGGAAGTCGACAGTGATCGCATTGCTGCAAAGATTTTATGACCCAGACTCAGGCGAGATCACGCTTGATGGAATAGAACTCCGAACGTTTCAGATCAAGTGGTTAAGACAGCAGATGGGGCTGGTGAGCCAGGAGCCAGTGTTATTCAATGACACCATCCGTGCCAATATTGCTTACGGAAAAGGAGGCGATGCAACGGAAGCGGAAATCATAGCCGCTGCGGAACTAGCCAACGCTCATAAGTTCATTAGTGGCTTGCACCATGGTTATGACGCGGTGGTGGGGGAGAGAGGACTGCAGTTATCAGGGGGCCAGAAACAAAGGGTGGCCATAGCACGTGCCATAATAAAGAGTCCAAAGATATTACTGCTAGATGAGGCCACGAGTGCGTTGGATGCAGAGTCGGAGCGAGTAGTTCAGGATGCATTAGACAGAGTAATGGTGAACAGGACTACGGTGGTCGTGGCACATCGGCTATCCACCATAAAGAATGCGGATGTGATTGCGGTGGTCAAGAACGGAGTGATAGTGGAGAAAGGAAAGCATGAGACGTTGATTAACATTAAAGACGGCTTCTATGCCTCCCTAGTCCAGCTTCATACCAGTGCTTCCACTGTATGA 3855 0.4669 MGENGLDGDATGHGKATASENQAETSTKEENREMAKQKGKADTVPFHRLFSFADSTDTLLMIVGTIGAIGNGMGLPFMTLLMGQMINVFGSNQQSTDTVAQVAKVSLKFVYLAIGSGVAACLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLVSTFIGGFVVAFVKGWLLALVMMAILPLLVVAGASMAFIIGRMASRGQTAYAKAANVVEQTLGSIRTVASFTGEKQAVARYSKFLVDAYKSGVHEGFVAGLGFGTVMFVFFCGYGLAVWFGAKMILERGYNGGTVINVIVAILTASMSLGQATPCLSAFAAGQAAAYKMFETIKRKPAIDAYDPSGKTFEDINGDIELKDVYFSYPTRPEELIFNGFSLHIPSGTTSALVGESGSGKSTVISLIERFYDPQAGEVLIDGINLKELQLRWIRRKIGLVSQEPVLFASSIKDNILYGKEGATIEEVRAAAELANAAKFIDKLPQGYDTMVGEHGTQLSGGQKQRIAIARAIIKDPRILLLDEATSALDAESERIVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLRDPEGAYSQLIRLQEVNRESEEPSERQNKGEISMESFRQSSQRRSLRRSISRGSSIGNSSRHSFSVPFGMPTVVNVPEPELEKLDAKKELPAVPIRRLASLNKPEIPVLLLGCVVAIINGAILPVFGLLISSVIKTFYEPPHEMKKDSKFWALIFLALGIASLLAIPSRGYLFSVAGSKLIQRIRLMCFERVVNMEVGWFDEPEHSSGVIGARLSADASTVRALVGDALGLLIQNIASTLTGLIIAFVASWELALVILVLIPLIGVNGYVQMKFMKGFSADAKMMYEDASQVANDAVGSIRTVASFCAEEKVMELYRRKCEGPMKSGIRLGLISGTGFGCSYFLLFSVYASSFYAGARLVDAGRTTFSDVFRVFFALTMAAMAVSQSSSMAPDSSKAKSATSSIFELIDRKSKVDSSDESGATLDIVKGEIELRHVSFKYPSRPDVQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGIELRTFQIKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISGLHHGYDAVVGERGLQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGFYASLVQLHTSASTV 1284
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00089 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1276 IPR003439 GO:0005524
Pral2150g00089 1284 SMART AAA_5 411 603 IPR003593 GO:0016887
Pral2150g00089 1284 SMART AAA_5 1066 1239 IPR003593 GO:0016887
Pral2150g00089 1284 CDD ABC_6TM_Pgp_ABCB1_D1_like 61 345 - -
Pral2150g00089 1284 SUPERFAMILY ABC transporter transmembrane region 699 1019 IPR036640 GO:0005524|GO:0016020
Pral2150g00089 1284 FunFam ABC transporter B family member 1 374 623 - -
Pral2150g00089 1284 Pfam ABC transporter 1058 1207 IPR003439 GO:0005524
Pral2150g00089 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1030 1277 IPR027417 -
Pral2150g00089 1284 FunFam ABC transporter B family member 9 48 380 - -
Pral2150g00089 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 718 1004 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2150g00089 1284 ProSitePatterns ABC transporters family signature. 1179 1193 IPR017871 GO:0005524|GO:0016887
Pral2150g00089 1284 MobiDBLite consensus disorder prediction 623 640 - -
Pral2150g00089 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 620 IPR003439 GO:0005524
Pral2150g00089 1284 PANTHER ABC TRANSPORTER B FAMILY 20 625 IPR039421 -
Pral2150g00089 1284 MobiDBLite consensus disorder prediction 622 671 - -
Pral2150g00089 1284 Pfam ABC transporter transmembrane region 717 990 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2150g00089 1284 Pfam ABC transporter transmembrane region 61 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2150g00089 1284 CDD ABC_6TM_Pgp_ABCB1_D2_like 707 1022 - -
Pral2150g00089 1284 SUPERFAMILY ABC transporter transmembrane region 47 368 IPR036640 GO:0005524|GO:0016020
Pral2150g00089 1284 Gene3D - 382 639 IPR027417 -
Pral2150g00089 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 622 IPR027417 -
Pral2150g00089 1284 Gene3D - 1030 1283 IPR027417 -
Pral2150g00089 1284 MobiDBLite consensus disorder prediction 641 671 - -
Pral2150g00089 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 349 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2150g00089 1284 MobiDBLite consensus disorder prediction 25 40 - -
Pral2150g00089 1284 FunFam ABC transporter B family member 1 697 1005 - -
Pral2150g00089 1284 CDD ABC_MTABC3_MDL1_MDL2 1039 1277 - -
Pral2150g00089 1284 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524|GO:0016887
Pral2150g00089 1284 FunFam ABC transporter B family member 1 1029 1279 - -
Pral2150g00089 1284 CDD ABC_MTABC3_MDL1_MDL2 384 622 - -
Pral2150g00089 1284 Gene3D ABC transporter type 1, transmembrane domain 107 1013 IPR036640 GO:0005524|GO:0016020
Pral2150g00089 1284 MobiDBLite consensus disorder prediction 1 40 - -
Pral2150g00089 1284 Pfam ABC transporter 403 551 IPR003439 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral2150g00089 Pral-Chr2150 387024 393300 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00089 37 1278 Calmodulin-binding Proteins AT2G36910 45.107 0.0 1071
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00089 K05658 - gmx:100777909 2026.52