Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00086 ATGGATCACAGCCCTCGTCTCCGCCGTGAATTGACCTTCTTCAACTCCGGCGACTTTCCACCCCATACTTCAGATCCAACACCCCAGAATCCCGGTTCCCATCGCCGTCCTCCCATCAAAGAAATGGATTTCTTCTCCCGTTCGGTTGAGAAAAGCTGTGATTCTGGCCCGGCAAATCCGAATCCAGATCTTGACGACCGCCGTGATGGAAGTGGATCGGTTCCTTCCACTGATTGGCCTATAAACACCGGCCTAAATCTAACGCGTGTAGGTTCTGGAACTTCAGAGGCAGCAAGTAATGAAAATCCTAATACAGAGCTGAGTATAATCCAAGGTGAATTACGGAGACTGCATGCAGAGAACAGGAAGCTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGCCAACTACAAGCTCAGCTGTTCATCGCTCTGCAAAAACAAAACTCTATGAAGGTTGGAGCAAATGGCATGGTGTCGGGGAAACAGTTGATGGACCCACAGCCATCTACCCATCTAGACATTAATGATGCATCGATTTCCGATGACAAGACTCAATCAGTTTCGGCGCCCTCAAACAATGCGGAGGTAATGTCAAACCAACGTGAACATCATTTGACTAAGCTTCTTGGGAAACGAGCTTTTCCTGAAGATTGTTTTGACCGCTCCTCTCAGAGCTGGGAGTCATCCATCACCACCAAGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCCGATCAGGTCCCTTTCAGGAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCTCCTCTGATAAGCGATGGGTGTCAATGGAGAAAATATGGTCAGAAAATGGCAAAGGGCAATCCTTGCCCTCGTGCTTATTATCGTTGCACTATGGCCGTAGGATGCCCTGTTCGTAAGCAGGTGCAAAGATGTGCCGAGGATAAGACAGTGCTGGTAACAACCTACGAAGGAAATCACAGCCACCCACTTCCTCCAGCAGCCAGCGCTATGGCGAATACAACATCGGCAGCGGCGGCGATGCTCCTTTCCAGTTCGACCTCAAGTACAAGCAAGGACGGTGTTACACATTCTGCGGGATACATGGGTTCAATGGCCTACCCCTACGCATCAATGGCCACACTATCAGCATCTGCACCATTTCCAACCATCACGCTGGATTTGACCCAAGTCACCAACGGCATGCAGCTGCAGCAACGAGCACATCCCTCATCAGGGGCCCCTTTTCCAATGCCAATAATATTGCACGGGTGTCCTCAGGGACAGCTAACGGGACATCCTATGATGTTCCCACAGAACTTGCTTCAGCTCGGGCAAAGGCTGCCGTTGAATTCGTCGTCTATGGTTGAGACTGTCAGTGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCACTGGCGGCTGCAATATCATCCCTCATAGGGGCGCCCGGTGGCGGCGGAGCAGCGGGTAACAACACGGTTGCTGCGCCGAACCCCATTCCTGTGCTGCCTGTCCCCCCGCAACTTCCTCGTTCATGCACTACGCTCTCCACCAACTAG 1554 0.5109 MDHSPRLRRELTFFNSGDFPPHTSDPTPQNPGSHRRPPIKEMDFFSRSVEKSCDSGPANPNPDLDDRRDGSGSVPSTDWPINTGLNLTRVGSGTSEAASNENPNTELSIIQGELRRLHAENRKLRTMLDQITKSYSQLQAQLFIALQKQNSMKVGANGMVSGKQLMDPQPSTHLDINDASISDDKTQSVSAPSNNAEVMSNQREHHLTKLLGKRAFPEDCFDRSSQSWESSITTKLQESKRSDEQVSDQVPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLVTTYEGNHSHPLPPAASAMANTTSAAAAMLLSSSTSSTSKDGVTHSAGYMGSMAYPYASMATLSASAPFPTITLDLTQVTNGMQLQQRAHPSSGAPFPMPIILHGCPQGQLTGHPMMFPQNLLQLGQRLPLNSSSMVETVSAAIASDPNLTAALAAAISSLIGAPGGGGAAGNNTVAAPNPIPVLPVPPQLPRSCTTLSTN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00086 517 Gene3D WRKY domain 252 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2150g00086 517 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 482 IPR044810 GO:0003700
Pral2150g00086 517 MobiDBLite consensus disorder prediction 1 106 - -
Pral2150g00086 517 SUPERFAMILY WRKY DNA-binding domain 261 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2150g00086 517 MobiDBLite consensus disorder prediction 75 106 - -
Pral2150g00086 517 FunFam probable WRKY transcription factor 31 253 330 - -
Pral2150g00086 517 Coils Coil 114 141 - -
Pral2150g00086 517 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2150g00086 517 SMART WRKY_cls 268 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2150g00086 517 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00086 Pral-Chr2150 367656 370459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00086 1 517 WRKY Transcription Factor Family AT4G01720 41.219 6.05e-86 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2150g00086 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00086 - - cill:122317500 458.373