Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00085 ATGGATCACAGCCCTCGTCTCCGCCGTGAATTGACCTTCTTCAACTCCGGCGACTTTCCACCCCATACTTCAGATCCAACACCCCAGAATCCCGGTTCCCATCGCCGTCCTCCCATCAAAGAAATGGATTTCTTCTCCCGTTCGGTTGAGAAAAGCTGTGATTCTGGCCCGGCAAATCCGAATCCAGATCTTGACGACCGCCGTGATGGAAGTGGATCGGTTCCTTCCACTGATTGGCCTATAAACACCGGCCTAAATCTAACGCGTGTAGGTTCTGGAACTTCAGAGGCAGCAAGTAATGAAAATCCTAATACAGAGGTATGGATCATCAATTCCTTAATTTTTCTTTTTGAATCCCGTAAAAAAGTGGCTTTTCTGGTTTCATATTTTCAGCTGAGTATAATCCAAGGTGAATTACGGAGACTGCATGCAGAGAACAGGAAGCTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGCCAACTACAAGCTCAGCTGTTCATCGCTCTGCAAAAACAAAACTCTATGAAGGTTGGAGCAAATGGCATGGTGTCGGGGAAACAGTTGATGGACCCACAGCCATCTACCCATCTAGACATTAATGATGCATCGATTTCCGATGACAAGACTCAATCAGTTTCGGCGCCCTCAAACAATGCGGAGAGCTGGGAGTCATCCATCACCACCAAGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCCGATCAGGTCCCTTTCAGGAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCTCCTCTGATAAGCGATGGGTGTCAATGGAGAAAATATGGTCAGAAAATGGCAAAGGGCAATCCTTGCCCTCGTGCTTATTATCGTTGCACTATGGCCGTAGGATGCCCTGTTCGTAAGCAGGTGCAAAGATGTGCCGAGGATAAGACAGTGCTGGTAACAACCTACGAAGGAAATCACAGCCACCCACTTCCTCCAGCAGCCAGCGCTATGGCGAATACAACATCGGCAGCGGCGGCGATGCTCCTTTCCAGTTCGACCTCAAGTACAAGCAAGGACGGTGTTACACATTCTGCGGGATACATGGGTTCAATGGCCTACCCCTACGCATCAATGGCCACACTATCAGCATCTGCACCATTTCCAACCATCACGCTGGATTTGACCCAAGTCACCAACGGCATGCAGCTGCAGCAACGAGCACATCCCTCATCAGGGGCCCCTTTTCCAATGCCAATAATATTGCACGGGTGTCCTCAGGGACAGCTAACGGGACATCCTATGATGTTCCCACAGAACTTGCTTCAGCTCGGGCAAAGGCTGCCGTTGAATTCGTCGTCTATGGTTGAGACTGTCAGTGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCACTGGCGGCTGCAATATCATCCCTCATAGGGGCGCCCGGTGGCGGCGGAGCAGCGGGTAACAACACGGTTGCTGCGCCGAACCCCATTCCTGTGCTGCCTGTCCCCCCGCAACTTCCTCGTTCATGCACTACGCTCTCCACCAACTAG 1542 0.5058 MDHSPRLRRELTFFNSGDFPPHTSDPTPQNPGSHRRPPIKEMDFFSRSVEKSCDSGPANPNPDLDDRRDGSGSVPSTDWPINTGLNLTRVGSGTSEAASNENPNTEVWIINSLIFLFESRKKVAFLVSYFQLSIIQGELRRLHAENRKLRTMLDQITKSYSQLQAQLFIALQKQNSMKVGANGMVSGKQLMDPQPSTHLDINDASISDDKTQSVSAPSNNAESWESSITTKLQESKRSDEQVSDQVPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLVTTYEGNHSHPLPPAASAMANTTSAAAAMLLSSSTSSTSKDGVTHSAGYMGSMAYPYASMATLSASAPFPTITLDLTQVTNGMQLQQRAHPSSGAPFPMPIILHGCPQGQLTGHPMMFPQNLLQLGQRLPLNSSSMVETVSAAIASDPNLTAALAAAISSLIGAPGGGGAAGNNTVAAPNPIPVLPVPPQLPRSCTTLSTN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00085 513 MobiDBLite consensus disorder prediction 1 100 - -
Pral2150g00085 513 SUPERFAMILY WRKY DNA-binding domain 257 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2150g00085 513 MobiDBLite consensus disorder prediction 75 100 - -
Pral2150g00085 513 MobiDBLite consensus disorder prediction 192 245 - -
Pral2150g00085 513 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2150g00085 513 Pfam WRKY DNA -binding domain 266 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2150g00085 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 131 478 IPR044810 GO:0003700
Pral2150g00085 513 FunFam probable WRKY transcription factor 31 249 326 - -
Pral2150g00085 513 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2150g00085 513 Coils Coil 139 166 - -
Pral2150g00085 513 Gene3D WRKY domain 248 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2150g00085 513 MobiDBLite consensus disorder prediction 192 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00085 Pral-Chr2150 367656 370459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00085 1 513 WRKY Transcription Factor Family AT4G01720 39.254 6.02e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2150g00085 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00085 - - cill:122317500 415.231