Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00083 ATGGAAGGGATTCCAATAGGCAGAAAACTGGATTTACTAGCTCAAGATGGCTACCACGAGTTAGTAAAGACGCTTGAGCACATGTTTGACACTACCATTATCTTGGGCTCTGAGATGGAGGAGGTACTTCAACCAGAGAGATGGTGGCATGTGCTAACCTATGAAGATGACGAAGGGGATCTGATCATGGTTGGAGATATCCCTTGGGAGATGTTCTTATCCACCGTCAAGAGATTGAGGATTGTCAGGGGAGACAAAATGGGGTGTTAA 270 0.4556 MEGIPIGRKLDLLAQDGYHELVKTLEHMFDTTIILGSEMEEVLQPERWWHVLTYEDDEGDLIMVGDIPWEMFLSTVKRLRIVRGDKMGC 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00083 89 Gene3D - 1 88 - -
Pral2150g00083 89 SUPERFAMILY CAD & PB1 domains 1 81 - -
Pral2150g00083 89 Pfam AUX/IAA family 1 85 IPR033389 -
Pral2150g00083 89 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 86 IPR003311 GO:0005634|GO:0006355
Pral2150g00083 89 ProSiteProfiles PB1 domain profile. 1 86 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00083 Pral-Chr2150 358882 359606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00083 1 81 B3 DNA Binding Superfamily AT4G23980 39.506 4.04e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral2150g00083 AUX_IAA 3.2e-26 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00083 K14484 - gmx:100783140 135.961