Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00082 ATGGCAGAAAAACATACTGAGTCAATCCGCCCGGGAATCACAGGCAGCTCCTCTCATCTTGCTTCCACGTGCGGCAATGATTTTGTTGAGCTGGTTTGGGAAAATGGCCAAATCCTGGTGCAAAGAGGGTCATCGAGCAGGACACCGAAGAGGCCTTCTTGCTTTGGTTATTCCATAAACCCCTCACATGACGCTTACGACCAAGATCACGGCATCGCTAAAAGAGCAAGGCTAAACACTTTCTACTCGCTTTTGGACTCTTCCCATCAAAATTCCCCACAAACCAATGACCCGTCTTCCTATGCGTTTGATTTGAAATGCACCGAAAGCAACAGTTTCAGTAATAAGCGCAGGGATGAATTCTCCGATTTAAGAGCAGAAAGAGAATCTAGTTCCAAGCCCACCGGGGGGGATACTCAGTTATGCTCCACTTCCTTACAGTCCCAGAAGCATGACTTGGGGTCTGATCAAAGAGTTGAAAAGATTAATTTCTCCAACTTCCTGAGACCTGCATTGTTTTCCAAATCTACTTATCAGGGAAATAGTGCAAGTGGGCATCCAAACAGTGGCGTTTCGGCTAGGGTGGAGGAGATCAAAGCAACTGATGGTGGCAGTAGCAAAGCTCTTGATCATTCCGTTGTGATTGACTCGGCTAAGGGATCACATAGTCCCAACGGAATTCATCCTGGCCAAGCAGCTTTTACTTCTAACAAAGCAAGCTCACCGACACCCTTTGATGGAAAAAAGGATCAGGAAACACTCCCTGATGAACAATCCGAAGCTGTTGGGTGCGATAGGGCCCTCAAGAGTCACGGATCACATGGTCAATATCATCATCGCCAAACACACAGTAGAAAAGGAAAAACAGCCGCTGAGTTTTCTGATGCACCCTTGGTAGCATCTTCTTCTTTGTGCTCTCTTGGAGCCTCGAATGACCCTACTATTCGTAGTACGAAACACGAGGACACCGACGATTCAGCCTATACAACTGACAATGATGAAGAAACAGAAGATACGACAACAAAGGAAACGCCGGCTCAAGATGGTTCAAGAGGCAAGAGAATCAGGAATACGAAGATGCATAATTTATCGGAGAGGAAGAGACGAGATAAGATTAACAAGAAGATGCGTGCATTAAAACAGCTAATACCTAATTGCAATAAGATGGACAAGGCTTCAATGCTGGACGACGCCATCGATTATCTGAAGACCCTCAAGCTTCAGTTGCAGGTATTGTCAATGGGAAGTGGGGTTTGTATGCCTCCAATGATGTCGATGTTAGCAGCAGGAGGTTGTGGGCAGCAGTTAGGCTTAGGCATCCCTTGCAGCCTCCCTCATCAGTTTGCAGGTGGCAGTATTCTTCCACAGCTCCCTCCTCACCTTCACAATAGTCTTCAAATGCTTCCTGGTTTCCCCAGTCATGTGCTTCCCAATATTCAATTCCCAATTTCCCAACAGTCACCTTTCATTTCCATGCCCCCCAAGCCTATCCAACCCTACCTCTCTTCCCACCTAACCACATTTGATCGCGACCCTGACCTTAATGCACAGCTTGTTTCAGCCGCACCTATGCCAAAAGTTGCTCAGGGATCAAATCCAAGTTGA 1605 0.4679 MAEKHTESIRPGITGSSSHLASTCGNDFVELVWENGQILVQRGSSSRTPKRPSCFGYSINPSHDAYDQDHGIAKRARLNTFYSLLDSSHQNSPQTNDPSSYAFDLKCTESNSFSNKRRDEFSDLRAERESSSKPTGGDTQLCSTSLQSQKHDLGSDQRVEKINFSNFLRPALFSKSTYQGNSASGHPNSGVSARVEEIKATDGGSSKALDHSVVIDSAKGSHSPNGIHPGQAAFTSNKASSPTPFDGKKDQETLPDEQSEAVGCDRALKSHGSHGQYHHRQTHSRKGKTAAEFSDAPLVASSSLCSLGASNDPTIRSTKHEDTDDSAYTTDNDEETEDTTTKETPAQDGSRGKRIRNTKMHNLSERKRRDKINKKMRALKQLIPNCNKMDKASMLDDAIDYLKTLKLQLQVLSMGSGVCMPPMMSMLAAGGCGQQLGLGIPCSLPHQFAGGSILPQLPPHLHNSLQMLPGFPSHVLPNIQFPISQQSPFISMPPKPIQPYLSSHLTTFDRDPDLNAQLVSAAPMPKVAQGSNPS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00082 534 MobiDBLite consensus disorder prediction 1 20 - -
Pral2150g00082 534 MobiDBLite consensus disorder prediction 133 152 - -
Pral2150g00082 534 MobiDBLite consensus disorder prediction 116 154 - -
Pral2150g00082 534 PANTHER TRANSCRIPTION FACTOR PIF3 1 507 IPR044273 GO:0003700|GO:0006355
Pral2150g00082 534 MobiDBLite consensus disorder prediction 217 290 - -
Pral2150g00082 534 Gene3D - 352 413 IPR036638 GO:0046983
Pral2150g00082 534 MobiDBLite consensus disorder prediction 339 369 - -
Pral2150g00082 534 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 357 416 IPR036638 GO:0046983
Pral2150g00082 534 MobiDBLite consensus disorder prediction 228 247 - -
Pral2150g00082 534 MobiDBLite consensus disorder prediction 116 132 - -
Pral2150g00082 534 CDD bHLH_AtPIF_like 356 417 IPR047265 -
Pral2150g00082 534 MobiDBLite consensus disorder prediction 308 370 - -
Pral2150g00082 534 SMART finulus 362 411 IPR011598 GO:0046983
Pral2150g00082 534 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 356 405 IPR011598 GO:0046983
Pral2150g00082 534 Pfam Helix-loop-helix DNA-binding domain 359 405 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00082 Pral-Chr2150 343269 346761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00082 162 424 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 32.584 2.79e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2150g00082 HLH 1.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00082 K12126 - pcin:129304463 806.979