Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00023 ATGGCGTCTTTGGAATCAATTGTGGATCCTATTGGTTCAGATACGTACCAAGAAGGCAATCAGAGAAAGCGTAGGAAAATCGAGCATGATGGCAGCAACGATCAGAATTCGCTCGCTCCGATTCCGTGGAGATCAGAGGCAGAGCAGCGGATCTATTCCTCCAAGCTCGTTGAAGCTCTCCGCCGCGTTCTTCGCCAGAGTTCTTCCGCTGCCAAGCCTCGCCCCGGACGCGATGTTCGTGAGATTGCCGACAGGGTTCTGGCAGTGACAGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATACTGGCCTCTCCTCTCAGCCGGAGAAAGTTCCAGAGGCAGCATAGGAAGGTGAAGAAGGCGGCGAACGGATTGAAGAAGCCAGAGGTTAGAAGGGAGAGAAGAAGGCTGCCGGCTGTGCAGAGGAAAGCGCGAGCTCTCAGCCGGTTGGTTCCCGGTTGCCGGAAGGTCTCGTTCCCGAGTCTTCTGGAAGAAACTACTGACTATATTTCGGCCTTGGAAATGCAAGTGCGAGCCATGACAGCACTCACCGAGCTACTCGGAGGTGGCGCGACGGCTGATCGGCTCGGGCGGCCTCGACCGTGA 606 0.5693 MASLESIVDPIGSDTYQEGNQRKRRKIEHDGSNDQNSLAPIPWRSEAEQRIYSSKLVEALRRVLRQSSSAAKPRPGRDVREIADRVLAVTAKGRTRWSRAILASPLSRRKFQRQHRKVKKAANGLKKPEVRRERRRLPAVQRKARALSRLVPGCRKVSFPSLLEETTDYISALEMQVRAMTALTELLGGGATADRLGRPRP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00023 201 CDD bHLH_AtIBH1_like 131 184 IPR044549 GO:0006355
Pral2150g00023 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 187 IPR044660 GO:0006355
Pral2150g00023 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 189 IPR036638 GO:0046983
Pral2150g00023 201 Gene3D - 114 188 IPR036638 GO:0046983
Pral2150g00023 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 173 IPR011598 GO:0046983
Pral2150g00023 201 MobiDBLite consensus disorder prediction 18 32 - -
Pral2150g00023 201 MobiDBLite consensus disorder prediction 1 44 - -
Pral2150g00023 201 MobiDBLite consensus disorder prediction 114 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00023 Pral-Chr2150 91027 92011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00023 43 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 53.165 5.52e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2150g00023 - - pcin:129310330 245.358