Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2150g00013 ATGGATTTCCAGGGATTCTTAAATGACTTGCAAGATTGGGAACTTTCTCGGAAAGACAAAACGCGAAAAATGAAGTCGCAAGCACTGCAAAAGGAAAAAGTTGCCGGTGGGGGGACTGCATCAAGAGGAGAAACTTTTTTTACAGAAAGTACTTCAGGGCATTATGATTTCTCAAGAAATAAAGATTCTTTTGATCATGTCCATAGTAGTTTCACCGCTGAAGATGTCCCCAATGCTGCTTCAGAAAAAGAACTGGGTAATGAGTACTTCAAGCAGAAGAAGTTTAAGGAAGCTATTGACTGCTATTCAAGAAGTATTGCCTTCTCACCGACAGCTGTGGCATATGCAAATAAAGCAATGGCCTTTATCAAAATCAGAAGATTTCAACAGGCTGAGGATGACTGTACAGAGGCCTTAAATCTAGATGATCGTTACATAAAAGCATACTCACGTCGAGCAACAGCCAGAAAAGAACTTGGGAAACTTAAAGAAGCAATGGAGGATGCTGAGTTTGCTCTGCGCCTGGAACCTGAAAATCAAGAAATCAAGAAACAGTATGCTGATATCAAATCTTTGTATGAGAATGAAATTCTTCAGAAAGCGTCTGGAGCTCTGGGAAGCTCTCTGCAGGTAACTCAAAAACTGGGAGAGTCAGCGACAAATACTTATAGGGGAACCGTCCATCCTGTTCCAAACGTTGCTGAAAAATCAGGGGCTGCTGACCTTCAAGATCACACGAAGGGACATAACAGAATTAACAAGCAAGAAATGAAGGCATCCGTTCAACATCTTGCTTCACATGTGGCTTCTCGAGTTATGGCTGAAGCTGCAAAAAATATAACACCGCCAAATTCAGCTTATCAGTTTGAGGTCTCGTGGAGAGGGTTTTCAGGTGATCCTGCCCTGCAGGCTCGTCTGTTAAAGGCCATATCTCCTCAAGATTTACCGAAGATATTCAAAAATGCCTTATCTTCTGCACTACTAATGGACATAATTAAGTGTGTGGCATCCTTTTTCACTGAAGATACAGCTCTGGCTGTCAGTTACATTGAACACTTGACTAAGGTTTCAAGATTTGACATGCTCATTGTGTGTCTTACATCAACAGATAAGCATGATCTGCGCAAGATCTGGGAGGAAGTGTTCTGCAACGAGGCAACTCCAATGGAGTATGCAGAGATTCTTGATAACCTCCGATCCAAATACTGCATTGAACATTGA 1221 0.4185 MDFQGFLNDLQDWELSRKDKTRKMKSQALQKEKVAGGGTASRGETFFTESTSGHYDFSRNKDSFDHVHSSFTAEDVPNAASEKELGNEYFKQKKFKEAIDCYSRSIAFSPTAVAYANKAMAFIKIRRFQQAEDDCTEALNLDDRYIKAYSRRATARKELGKLKEAMEDAEFALRLEPENQEIKKQYADIKSLYENEILQKASGALGSSLQVTQKLGESATNTYRGTVHPVPNVAEKSGAADLQDHTKGHNRINKQEMKASVQHLASHVASRVMAEAAKNITPPNSAYQFEVSWRGFSGDPALQARLLKAISPQDLPKIFKNALSSALLMDIIKCVASFFTEDTALAVSYIEHLTKVSRFDMLIVCLTSTDKHDLRKIWEEVFCNEATPMEYAEILDNLRSKYCIEH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2150g00013 406 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Pral2150g00013 406 Gene3D Tetratricopeptide repeat domain 67 177 IPR011990 GO:0005515
Pral2150g00013 406 ProSiteProfiles TPR repeat profile. 146 179 IPR019734 GO:0005515
Pral2150g00013 406 Pfam Tetratricopeptide repeat 147 179 IPR019734 GO:0005515
Pral2150g00013 406 SUPERFAMILY TPR-like 75 195 IPR011990 GO:0005515
Pral2150g00013 406 Coils Coil 152 172 - -
Pral2150g00013 406 PANTHER OS05G0129900 PROTEIN 1 247 - -
Pral2150g00013 406 Pfam Potential Monad-binding region of RPAP3 282 371 IPR025986 -
Pral2150g00013 406 Pfam Tetratricopeptide repeat 83 111 IPR001440 GO:0005515
Pral2150g00013 406 SMART tpr_5 113 145 IPR019734 GO:0005515
Pral2150g00013 406 SMART tpr_5 79 112 IPR019734 GO:0005515
Pral2150g00013 406 SMART tpr_5 146 179 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2150g00013 Pral-Chr2150 60784 65694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2150g00013 57 183 Calmodulin-binding Proteins AT3G25230 30.070 9.60e-10 58.5