Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2149g00023 ATGTCCCCTTCCTTGTCTCCATATGAGTTGATTGAGACTATTGTTGAGAGTGTTTCTGAAAGAGTAGACCATGGACAATTATTTGTTGCTGAGCATCCAGTGGGAATAGAATCACGGATTCAAGAATTGACAATTGAATGGTCAGAAAAGAGATCTCAAAAACCTCTTATCATAGGCCTATGGGGGATGGGAGGTATCGGCAAAACAACTGTTGCTAAAGGCATCTACAATACAATTGGCCCACAGTTTGGAAGAGCACGAAGTTTTCTTGCAAATATAAGAGAAAATTCAAAAAGTGCTAATGGCTTAGTTGTTTTGCAGAAGCAATTAATTTCTGATATCATTAAGACAGATTTTTCCAAGATACCTAATATTGATAGAGGGAAAAGAATAATTCAGGAAAGATTTCCTACCATAAAAGCATTTGTTGTATTGGATGATGTGGATAGTATCAATCAACTGAACACATTTTGTGGGAGTATTGAATGGTTTTGTCCTGGGAGTATAATATTCATAACAACTAGAGATCTACATTTGCTTGACGTTATTAATGCTGACCATAAGTATAGAATGAGAAAAATGAAGGGAACAGAGCCTCTTCTACTTTTCAGTTGGCATGCCTTTAAGCAACCACAACCCTCTGAAAACTTTGTAAAATTATCTGAAAAGGTAGTTTCTTATTGTGATGGACTTCCACTAGCTCTTGAAGTCCTTGGTTCTTATTTGCATGGGAGAAAAGAAAAACAATGGGAGAGTGCATTGTCCAAACTACAGAGGATTCCTAAGAAAGATATACACAAAAAGTTAAAAATAAGTTATGATGCATTGGACAACCATACAGAAAAGGATGTTTTCCTTGACATATGTTGCTTTTTTATCAACAAGGACAGCAACTATGTTACACAGATATTAGATGGTTGTGAACTTCATGCAGAAAATGGATTACAAATCCTCATAGAGCGGAGCCTGGTGAAAGTAGGTAGAAATAATAAGCTTGAAATGCATGATTTATTACAAAAAATGGGAAAAGAAATTATCCGTGAAGACTCACCTAAAGATCCTGAGAAACGTAGCCGACTATGGTCTCAAGAAGATGTGCTTGATGTGTTAACAGATCATACAGGAACCAAAGCTATTGAGGGTATATCTCTAAAGGTACCAAAAACCCATAGAGATCCCATCGATTCTAAGGCATTTAAGAAGATGAAGAAACTCAGATTACTCCAACTAGACTATGTGAATCTTAAAGGAGATTATAAACATCTTTCCAAAAAGCTGAGAAGTTGCCAATGTTGA 1296 0.3611 MSPSLSPYELIETIVESVSERVDHGQLFVAEHPVGIESRIQELTIEWSEKRSQKPLIIGLWGMGGIGKTTVAKGIYNTIGPQFGRARSFLANIRENSKSANGLVVLQKQLISDIIKTDFSKIPNIDRGKRIIQERFPTIKAFVVLDDVDSINQLNTFCGSIEWFCPGSIIFITTRDLHLLDVINADHKYRMRKMKGTEPLLLFSWHAFKQPQPSENFVKLSEKVVSYCDGLPLALEVLGSYLHGRKEKQWESALSKLQRIPKKDIHKKLKISYDALDNHTEKDVFLDICCFFINKDSNYVTQILDGCELHAENGLQILIERSLVKVGRNNKLEMHDLLQKMGKEIIREDSPKDPEKRSRLWSQEDVLDVLTDHTGTKAIEGISLKVPKTHRDPIDSKAFKKMKKLRLLQLDYVNLKGDYKHLSKKLRSCQC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2149g00023 431 Pfam NB-ARC domain 40 277 IPR002182 GO:0043531
Pral2149g00023 431 Gene3D - 16 189 IPR027417 -
Pral2149g00023 431 PRINTS Disease resistance protein signature 228 242 - -
Pral2149g00023 431 PRINTS Disease resistance protein signature 135 149 - -
Pral2149g00023 431 PRINTS Disease resistance protein signature 57 72 - -
Pral2149g00023 431 PRINTS Disease resistance protein signature 400 416 - -
Pral2149g00023 431 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 429 IPR044974 GO:0006952
Pral2149g00023 431 Gene3D - 194 277 IPR042197 -
Pral2149g00023 431 FunFam Disease resistance protein (TIR-NBS-LRR class) 196 277 - -
Pral2149g00023 431 SUPERFAMILY "Winged helix" DNA-binding domain 264 370 IPR036390 -
Pral2149g00023 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 288 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2149g00023 Pral-Chr2149 157547 160113 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2149g00023 34 427 WRKY Transcription Factor Family AT5G45050 31.280 3.48e-50 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2149g00023 - - pcin:129287706 546.969