Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2149g00020 ATGGCTGCCGCTGCTGCTTCTTCTTCTTGCAGTTCTTCCTGGACTAACCATGTGTACTTGAGTGTTAAAGGTGAAGATACTTGTGGTTTCACTTCTCATCTTTATAATGCTCTGAAACAGAGAGGAATCCATGCTTTCATGAACCATCCATGGAATGAGACGGATATCTCTGGAGCAATAATACCAACAATTGAAGAATCAAGAATTGCGTTAGTAATTCTCTCTCCAGTTTATGCTTTTTCACCATCGTGGCTGAATGAGCTGGTGAAGATAATGGAGTGTAAGAGAAGTCTAGCTCAGGTGGTTATCCCCATATTCTATAACGTAGATCCCTCTGATGTTCTTCATCTGAGAGGCCAATATGGTCAAGCAATGGAAATACAGGAGCTATCGCCGGGAAGGGGCCGTGATCAGTTGTTGCGGTGGAGGCAAGCACTTGCCGAAATATCCACAATTCCCGGCTTTACTTACTCAGCATCTCAAGACAGCAGTTGGACTGAAAGTGAGCTGGTTGAGAAAATTGTTGAGCAAGTTTCACGAGAATTACCGTCTACTTCTAACCATCCAACGGGAATACAGTCACAAGTTCATAAACTAAAAGTTGATGAATGGTTGAATTATGACGTGTTCTTGAGTTTCAGAGGCAAAGACACTCGTCGCGGTTTCACTTCTCATCTTTATAAAGCTCTAAGGCAGTCAGGAATCCATGCTTTCATGGACGATACAAGGCTTGAAAGGGGAGAAGAGATCTCCGTCTCATTATTGCAAGCAATTGAAAGATCCCGAATTGCGCTCGTAATTCTGTCTCCAGATTATGCGTCTTCCACATGGTGTCTGGATGAACTGACAGCCATATATGATGAAGCCATGCAAGTACACGAGGAAAGGTTTGGAAGAGAGTGTGATCGGGTGATGCAGTGGAGGAAGGCACTCAATTACATTTCCAAACTTGCCGGCTTTGATTTATCACAAAATTGGATTGAAAGTGATATGATTCAGACTATTATTGAGCATATTTCAGAAAGAGTAGACACTGGACAATTGGTTGTAGCTGAGCATCCAGTGGGAATAAAGCTTCGAGTTGATGAATTGACAATTGAATGGTCAGGGAAAAACAAAATCCAAAAACCTCTTATCATAGGCCTCTGGGGGATGGGAGGCGTTGGCAAAACAACTGCCGCCAAAGCCATTTACAATACAATTGGCCTTGAGTTTAGAAGAGCAAGAAGTTTTCTTGCAAATATAAGAGAAACTTCAAAGCATGTTAATGGCCAAGTCAATTTGCAAAAGCAACTCATTTTTGATATACTTCAAGTAAAAGTTTCCAAGATACCTAACATTGACAGAGGAAAAAAAATAATTCAAGAAAGATTTCCCAACATAAAATCATTTATTGTATTGGATGATGTGGACAGTGTCAATCAACTGAGCACACTTTGTGGTAGTCTTGAATGGTTTTGTCCTGGAAGTATAGTGGTCATAACAACTAGAAATAGCCATTTACTTGATGCCATTAATGCTGACCACAAATATGAAATAGAAGAAATGAATCAAATGGAGTCTCTTATGCTTTTTAGTTGGCATGCCTTTAAGCAAGCCGATCCCAAGGAAGACTTCAAAGAATTGTCTAAAATGGTAGTTGGATATTGTGATGGACTTCCACTGGCTCTTGAAATCCTTGGCTCCTATTTGCGTGGGAGAACAATTAAACAATGGGAGAATGTGTTGTCGAAATTACAAAGGATTCTTACTAAAAGTATACATGAAAAGTTAAAAATAAGCTATGATGGATTGGATGATGATACAGAGAAGGATATTTTCCTTGACATATGTTGCTTCTTTATCAATAAGGACAGGAACTATGTTACACAGATATTAGATGGTTGTGAACTTTATGCAGAAAATGGATTACAAATCCTCATAGAGCGGAGCCTGGTGAGAGTAGGTAGAAATAATAAGCTTGAAATGCATGATTTATTACAAGAAATGGGAAAAGAAATCATCCGTGGAAGCCCACCTAAAGATCTTAAGAAACATAGCAGACTATGGTCTCAAGAAGATGTGCTTGATGTGTTAACAGATCATACAGGAACCGAAGCTATTGAGGGTATATCTCTAAAGGTATCAAAAACCCATAGAGATCCCATCGATTCTAAGGCATTTAAGAAGATGAAGAGACTCAGATTGCTCCAACTAGACTATGTAAATCTTAAAGGAGATTATAAACACCTTTCCAAAAAGTTGAGGTGGGTTCGTTGGCATGGATTTTCATCAAAATACACTCCAAACAACTTTTACCAAGAAAAACTAGTTGCTATTGACTTCAAATATAGCAACCTCAAAGTAGTTTGGAAAGAGTCCAAGAAGTTGCCAATGTTGAAGACACTCAATCTCAGCCATTCACCTTCCTTGACACAAACTCCTGATTTTACATATCTACCTAAACTTGAAAAGCTTATGATAAAAGATTGTAAGAGTTTGATGTTAATTCAAGAGAGCATTGGGGATCTAAAAACTCTCCTCCATCTTAATCTCAAAGATTGCAAGAGCCTCAAAGATCTTCCTAGAAGCATCTACAAGTTGAAATCATTAAAGACTTTCATTATTTCTGGTTGTTCATTGATTGACCATTTAGAAGATGATATTGAGCAAATGCGGTCCTTGACAATTCTTATGGCAGATAACACTTCCATAACACAACTACCCAAGTCATTACCAAGATTGGAAGGGCTTAAGCATGGATATGTCTCTTTCCCTGGTCATGAAGGAAGAGGGCAAGACATATTTCCTTCTCTCATATGGTCTTGGACGTCACCTTATGATTTTCCTCAATCCCCTTCCAGGTACGTGGGAGCAATGTCGATCACAGTTTCGATTTAA 2880 0.3906 MAAAAASSSCSSSWTNHVYLSVKGEDTCGFTSHLYNALKQRGIHAFMNHPWNETDISGAIIPTIEESRIALVILSPVYAFSPSWLNELVKIMECKRSLAQVVIPIFYNVDPSDVLHLRGQYGQAMEIQELSPGRGRDQLLRWRQALAEISTIPGFTYSASQDSSWTESELVEKIVEQVSRELPSTSNHPTGIQSQVHKLKVDEWLNYDVFLSFRGKDTRRGFTSHLYKALRQSGIHAFMDDTRLERGEEISVSLLQAIERSRIALVILSPDYASSTWCLDELTAIYDEAMQVHEERFGRECDRVMQWRKALNYISKLAGFDLSQNWIESDMIQTIIEHISERVDTGQLVVAEHPVGIKLRVDELTIEWSGKNKIQKPLIIGLWGMGGVGKTTAAKAIYNTIGLEFRRARSFLANIRETSKHVNGQVNLQKQLIFDILQVKVSKIPNIDRGKKIIQERFPNIKSFIVLDDVDSVNQLSTLCGSLEWFCPGSIVVITTRNSHLLDAINADHKYEIEEMNQMESLMLFSWHAFKQADPKEDFKELSKMVVGYCDGLPLALEILGSYLRGRTIKQWENVLSKLQRILTKSIHEKLKISYDGLDDDTEKDIFLDICCFFINKDRNYVTQILDGCELYAENGLQILIERSLVRVGRNNKLEMHDLLQEMGKEIIRGSPPKDLKKHSRLWSQEDVLDVLTDHTGTEAIEGISLKVSKTHRDPIDSKAFKKMKRLRLLQLDYVNLKGDYKHLSKKLRWVRWHGFSSKYTPNNFYQEKLVAIDFKYSNLKVVWKESKKLPMLKTLNLSHSPSLTQTPDFTYLPKLEKLMIKDCKSLMLIQESIGDLKTLLHLNLKDCKSLKDLPRSIYKLKSLKTFIISGCSLIDHLEDDIEQMRSLTILMADNTSITQLPKSLPRLEGLKHGYVSFPGHEGRGQDIFPSLIWSWTSPYDFPQSPSRYVGAMSITVSI 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2149g00020 959 SUPERFAMILY L domain-like 670 913 - -
Pral2149g00020 959 Pfam NB-ARC domain 377 592 IPR002182 GO:0043531
Pral2149g00020 959 Gene3D - 286 343 IPR035897 -
Pral2149g00020 959 FunFam Disease resistance protein (TIR-NBS-LRR class) 517 599 - -
Pral2149g00020 959 SUPERFAMILY "Winged helix" DNA-binding domain 587 692 IPR036390 -
Pral2149g00020 959 Gene3D - 515 599 IPR042197 -
Pral2149g00020 959 PRINTS Disease resistance protein signature 788 804 - -
Pral2149g00020 959 PRINTS Disease resistance protein signature 379 394 - -
Pral2149g00020 959 PRINTS Disease resistance protein signature 457 471 - -
Pral2149g00020 959 PRINTS Disease resistance protein signature 550 564 - -
Pral2149g00020 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 207 887 IPR044974 GO:0006952
Pral2149g00020 959 Gene3D - 344 512 IPR027417 -
Pral2149g00020 959 Gene3D Ribonuclease Inhibitor 697 927 IPR032675 -
Pral2149g00020 959 Pfam TIR domain 18 190 IPR000157 GO:0007165
Pral2149g00020 959 Pfam TIR domain 206 289 IPR000157 GO:0007165
Pral2149g00020 959 Gene3D - 205 285 IPR035897 -
Pral2149g00020 959 ProSiteProfiles TIR domain profile. 205 343 IPR000157 GO:0007165
Pral2149g00020 959 Coils Coil 959 959 - -
Pral2149g00020 959 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral2149g00020 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 610 IPR027417 -
Pral2149g00020 959 SUPERFAMILY Toll/Interleukin receptor TIR domain 205 320 IPR035897 -
Pral2149g00020 959 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral2149g00020 959 Gene3D - 9 188 IPR035897 -
Pral2149g00020 959 SMART till_3 206 317 IPR000157 GO:0007165
Pral2149g00020 959 SMART till_3 15 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2149g00020 Pral-Chr2149 113449 117694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2149g00020 206 908 WRKY Transcription Factor Family AT4G12020 28.070 1.36e-67 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2149g00020 - - pcin:129287706 928.702