Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2149g00020 | ATGGCTGCCGCTGCTGCTTCTTCTTCTTGCAGTTCTTCCTGGACTAACCATGTGTACTTGAGTGTTAAAGGTGAAGATACTTGTGGTTTCACTTCTCATCTTTATAATGCTCTGAAACAGAGAGGAATCCATGCTTTCATGAACCATCCATGGAATGAGACGGATATCTCTGGAGCAATAATACCAACAATTGAAGAATCAAGAATTGCGTTAGTAATTCTCTCTCCAGTTTATGCTTTTTCACCATCGTGGCTGAATGAGCTGGTGAAGATAATGGAGTGTAAGAGAAGTCTAGCTCAGGTGGTTATCCCCATATTCTATAACGTAGATCCCTCTGATGTTCTTCATCTGAGAGGCCAATATGGTCAAGCAATGGAAATACAGGAGCTATCGCCGGGAAGGGGCCGTGATCAGTTGTTGCGGTGGAGGCAAGCACTTGCCGAAATATCCACAATTCCCGGCTTTACTTACTCAGCATCTCAAGACAGCAGTTGGACTGAAAGTGAGCTGGTTGAGAAAATTGTTGAGCAAGTTTCACGAGAATTACCGTCTACTTCTAACCATCCAACGGGAATACAGTCACAAGTTCATAAACTAAAAGTTGATGAATGGTTGAATTATGACGTGTTCTTGAGTTTCAGAGGCAAAGACACTCGTCGCGGTTTCACTTCTCATCTTTATAAAGCTCTAAGGCAGTCAGGAATCCATGCTTTCATGGACGATACAAGGCTTGAAAGGGGAGAAGAGATCTCCGTCTCATTATTGCAAGCAATTGAAAGATCCCGAATTGCGCTCGTAATTCTGTCTCCAGATTATGCGTCTTCCACATGGTGTCTGGATGAACTGACAGCCATATATGATGAAGCCATGCAAGTACACGAGGAAAGGTTTGGAAGAGAGTGTGATCGGGTGATGCAGTGGAGGAAGGCACTCAATTACATTTCCAAACTTGCCGGCTTTGATTTATCACAAAATTGGATTGAAAGTGATATGATTCAGACTATTATTGAGCATATTTCAGAAAGAGTAGACACTGGACAATTGGTTGTAGCTGAGCATCCAGTGGGAATAAAGCTTCGAGTTGATGAATTGACAATTGAATGGTCAGGGAAAAACAAAATCCAAAAACCTCTTATCATAGGCCTCTGGGGGATGGGAGGCGTTGGCAAAACAACTGCCGCCAAAGCCATTTACAATACAATTGGCCTTGAGTTTAGAAGAGCAAGAAGTTTTCTTGCAAATATAAGAGAAACTTCAAAGCATGTTAATGGCCAAGTCAATTTGCAAAAGCAACTCATTTTTGATATACTTCAAGTAAAAGTTTCCAAGATACCTAACATTGACAGAGGAAAAAAAATAATTCAAGAAAGATTTCCCAACATAAAATCATTTATTGTATTGGATGATGTGGACAGTGTCAATCAACTGAGCACACTTTGTGGTAGTCTTGAATGGTTTTGTCCTGGAAGTATAGTGGTCATAACAACTAGAAATAGCCATTTACTTGATGCCATTAATGCTGACCACAAATATGAAATAGAAGAAATGAATCAAATGGAGTCTCTTATGCTTTTTAGTTGGCATGCCTTTAAGCAAGCCGATCCCAAGGAAGACTTCAAAGAATTGTCTAAAATGGTAGTTGGATATTGTGATGGACTTCCACTGGCTCTTGAAATCCTTGGCTCCTATTTGCGTGGGAGAACAATTAAACAATGGGAGAATGTGTTGTCGAAATTACAAAGGATTCTTACTAAAAGTATACATGAAAAGTTAAAAATAAGCTATGATGGATTGGATGATGATACAGAGAAGGATATTTTCCTTGACATATGTTGCTTCTTTATCAATAAGGACAGGAACTATGTTACACAGATATTAGATGGTTGTGAACTTTATGCAGAAAATGGATTACAAATCCTCATAGAGCGGAGCCTGGTGAGAGTAGGTAGAAATAATAAGCTTGAAATGCATGATTTATTACAAGAAATGGGAAAAGAAATCATCCGTGGAAGCCCACCTAAAGATCTTAAGAAACATAGCAGACTATGGTCTCAAGAAGATGTGCTTGATGTGTTAACAGATCATACAGGAACCGAAGCTATTGAGGGTATATCTCTAAAGGTATCAAAAACCCATAGAGATCCCATCGATTCTAAGGCATTTAAGAAGATGAAGAGACTCAGATTGCTCCAACTAGACTATGTAAATCTTAAAGGAGATTATAAACACCTTTCCAAAAAGTTGAGGTGGGTTCGTTGGCATGGATTTTCATCAAAATACACTCCAAACAACTTTTACCAAGAAAAACTAGTTGCTATTGACTTCAAATATAGCAACCTCAAAGTAGTTTGGAAAGAGTCCAAGAAGTTGCCAATGTTGAAGACACTCAATCTCAGCCATTCACCTTCCTTGACACAAACTCCTGATTTTACATATCTACCTAAACTTGAAAAGCTTATGATAAAAGATTGTAAGAGTTTGATGTTAATTCAAGAGAGCATTGGGGATCTAAAAACTCTCCTCCATCTTAATCTCAAAGATTGCAAGAGCCTCAAAGATCTTCCTAGAAGCATCTACAAGTTGAAATCATTAAAGACTTTCATTATTTCTGGTTGTTCATTGATTGACCATTTAGAAGATGATATTGAGCAAATGCGGTCCTTGACAATTCTTATGGCAGATAACACTTCCATAACACAACTACCCAAGTCATTACCAAGATTGGAAGGGCTTAAGCATGGATATGTCTCTTTCCCTGGTCATGAAGGAAGAGGGCAAGACATATTTCCTTCTCTCATATGGTCTTGGACGTCACCTTATGATTTTCCTCAATCCCCTTCCAGGTACGTGGGAGCAATGTCGATCACAGTTTCGATTTAA | 2880 | 0.3906 | MAAAAASSSCSSSWTNHVYLSVKGEDTCGFTSHLYNALKQRGIHAFMNHPWNETDISGAIIPTIEESRIALVILSPVYAFSPSWLNELVKIMECKRSLAQVVIPIFYNVDPSDVLHLRGQYGQAMEIQELSPGRGRDQLLRWRQALAEISTIPGFTYSASQDSSWTESELVEKIVEQVSRELPSTSNHPTGIQSQVHKLKVDEWLNYDVFLSFRGKDTRRGFTSHLYKALRQSGIHAFMDDTRLERGEEISVSLLQAIERSRIALVILSPDYASSTWCLDELTAIYDEAMQVHEERFGRECDRVMQWRKALNYISKLAGFDLSQNWIESDMIQTIIEHISERVDTGQLVVAEHPVGIKLRVDELTIEWSGKNKIQKPLIIGLWGMGGVGKTTAAKAIYNTIGLEFRRARSFLANIRETSKHVNGQVNLQKQLIFDILQVKVSKIPNIDRGKKIIQERFPNIKSFIVLDDVDSVNQLSTLCGSLEWFCPGSIVVITTRNSHLLDAINADHKYEIEEMNQMESLMLFSWHAFKQADPKEDFKELSKMVVGYCDGLPLALEILGSYLRGRTIKQWENVLSKLQRILTKSIHEKLKISYDGLDDDTEKDIFLDICCFFINKDRNYVTQILDGCELYAENGLQILIERSLVRVGRNNKLEMHDLLQEMGKEIIRGSPPKDLKKHSRLWSQEDVLDVLTDHTGTEAIEGISLKVSKTHRDPIDSKAFKKMKRLRLLQLDYVNLKGDYKHLSKKLRWVRWHGFSSKYTPNNFYQEKLVAIDFKYSNLKVVWKESKKLPMLKTLNLSHSPSLTQTPDFTYLPKLEKLMIKDCKSLMLIQESIGDLKTLLHLNLKDCKSLKDLPRSIYKLKSLKTFIISGCSLIDHLEDDIEQMRSLTILMADNTSITQLPKSLPRLEGLKHGYVSFPGHEGRGQDIFPSLIWSWTSPYDFPQSPSRYVGAMSITVSI | 959 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2149g00020 | 959 | SUPERFAMILY | L domain-like | 670 | 913 | - | - | |
Pral2149g00020 | 959 | Pfam | NB-ARC domain | 377 | 592 | IPR002182 | GO:0043531 | |
Pral2149g00020 | 959 | Gene3D | - | 286 | 343 | IPR035897 | - | |
Pral2149g00020 | 959 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 517 | 599 | - | - | |
Pral2149g00020 | 959 | SUPERFAMILY | "Winged helix" DNA-binding domain | 587 | 692 | IPR036390 | - | |
Pral2149g00020 | 959 | Gene3D | - | 515 | 599 | IPR042197 | - | |
Pral2149g00020 | 959 | PRINTS | Disease resistance protein signature | 788 | 804 | - | - | |
Pral2149g00020 | 959 | PRINTS | Disease resistance protein signature | 379 | 394 | - | - | |
Pral2149g00020 | 959 | PRINTS | Disease resistance protein signature | 457 | 471 | - | - | |
Pral2149g00020 | 959 | PRINTS | Disease resistance protein signature | 550 | 564 | - | - | |
Pral2149g00020 | 959 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 207 | 887 | IPR044974 | GO:0006952 | |
Pral2149g00020 | 959 | Gene3D | - | 344 | 512 | IPR027417 | - | |
Pral2149g00020 | 959 | Gene3D | Ribonuclease Inhibitor | 697 | 927 | IPR032675 | - | |
Pral2149g00020 | 959 | Pfam | TIR domain | 18 | 190 | IPR000157 | GO:0007165 | |
Pral2149g00020 | 959 | Pfam | TIR domain | 206 | 289 | IPR000157 | GO:0007165 | |
Pral2149g00020 | 959 | Gene3D | - | 205 | 285 | IPR035897 | - | |
Pral2149g00020 | 959 | ProSiteProfiles | TIR domain profile. | 205 | 343 | IPR000157 | GO:0007165 | |
Pral2149g00020 | 959 | Coils | Coil | 959 | 959 | - | - | |
Pral2149g00020 | 959 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 154 | IPR035897 | - | |
Pral2149g00020 | 959 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 341 | 610 | IPR027417 | - | |
Pral2149g00020 | 959 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 205 | 320 | IPR035897 | - | |
Pral2149g00020 | 959 | ProSiteProfiles | TIR domain profile. | 14 | 182 | IPR000157 | GO:0007165 | |
Pral2149g00020 | 959 | Gene3D | - | 9 | 188 | IPR035897 | - | |
Pral2149g00020 | 959 | SMART | till_3 | 206 | 317 | IPR000157 | GO:0007165 | |
Pral2149g00020 | 959 | SMART | till_3 | 15 | 152 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2149g00020 | Pral-Chr2149 | 113449 | 117694 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2149g00020 | 206 | 908 | WRKY Transcription Factor Family | AT4G12020 | 28.070 | 1.36e-67 | 246 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2149g00020 | - | - | pcin:129287706 | 928.702 |