Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2149g00017 ATGTGTCAAACTCAGAATGCTTTCATAATGTCCGAAGTTGAGCTGCTTGATACCATTGTGAAGGATGTTTTAGAGAAAGTAGATGCTGGACAATTGTTTGTTGCTGAGCGTCCAGTAGGAATAGAGTCTCAAGTTCGGAAACTGACAAGTAAATTGTCAAAAAAGACATTAACAAAGGCTCTTATCATTGGCCTCTGGGGGATGGGAGGCGTTGGCAAAACTACTGTTGCCAAAGCCTTTTACAATACAATTGGTCGTACATTTAGAAGAGCAAGAAGTTTTCTTGCTCAGATAAGAGAAAATTCAAAGCATTCTAATGACCTAGTTAATTTGCAAGAGCAACTCATTTCTGATATCATTAATACAGAAGTTTTCAAGATACCTAACGTTGATAGAGGGATAAAGATACTTCAGGAAAGACTTCCCCACATAAAAGCATTTATTGTATTGGATGATGTGGATAGTGTCAATCAGCTAAATGCTTTATGTGGAAGTCTTGAATGGTTTTGTCCTGGGAGTATAATAGTCATAACAACTAGAGATCTGCATCTGCTTAGTGTCATTAGAGCTGATCACAAGTATAAAATGGAAACAATGAATGAAATTGAGTCACTCGAGCTTTTTAGTTGGCATGCCTTTAAACAAAAAGCTCCCCTTGAAAACTTCATAGAACTTTCTAAAAATGTAGTTGCTTACTGCGGAGGACTTCCTCTAGCTCTTGAAGTCCTTGGTTCTTATTTGTTTGATAGAGAAATTGAAGAATGGGAGGATGTGTTGTCCAAACTAGAAAGGATTCCAAATGATGAGATACAAGCAAAGTTAAAAATAAGTTTTGATGGATTAAAGGATGATATGGAGAAGAATATATTTCTTGACATATGTTGCTTCTTTATCAATAAGGATAGAAACTATGCGACGCATATATTAAATGGATGTGGATTTAATGCAAAAATCGGAATAACAACCCTCATTGAGCGATGCCTAGTAAATTTTAATAGGAAGAATAATAAGCTTGAAATGCATGACTTATTACGTGATATGGGAAGAGAAATCATTTGTGGAAGCCCACGAAAGGACCTCGAGGATCGCAGTAGATTGTGGTTTCAGGAGGATGTAACTGAAGTGTTAATGCAAAACACGGGAACAAAAGTTATTGAGGGCATATCCTTAAAGAAGCCCCATGAAGTATGTGAGATTGATGCTAAGGCATTCAAGGCAATGAGAAAACTCAGATTGCTCCAATTAGAGTATGTAAATCTTGAAGGAGATTATAGGCATCTTTCCAATAAGCTAAGGTGGCTTTGTTGGCCTGGATTTCCTTTAAAATCTATACCTGACAGCTTGTATCAGAAAAACTTAGTTGCTATTGACTTTAAATACAGCAACCTCAGGCTAGTTTGGAAGAAGCCCCAATTGTTGCAGTGTTTGACAATCCTCATTCTCAGTCACTCACCTTATTTGAGACAAACTCCTGATTTTACAAACCTGCCAAATCTTGAAAAGCTAGTACTGAAAGATTGTCCGAGCTTGAAGATAGTTCACCAAAGCATTGGAGATCTAAAAAAAATCATTTTGGTAAATCTAGAAGACTGCAAGTGCCTAAGGGTTCTTCCTAGAAGCATCTACAAGTTGAAATCAGTAAAAACCCTCATTCTTTCTGGTTGTTCGTTGCTTGACCATTTGGAAGAAGATATTGAGCAGATGGAATCCATGACGGTACTAGAGGCAGATAATACTGCCATAACAGTAGTACCCAAGTCATTAGTAAGATTGGAAGCGCTTAAGCATGGATATGTATCTTTCCCAGGCCTTAAAGGAAGAGCACAAGATGTATTTCCTTCTCTCATATGGTCTTGGATGTCACCGACCGATATTCCCCAGTCCAGCAGTGAAGCATTTTTGCTGAGGATGTCATCTCTAGTTTTTTCTGTTGTACAGAATGACGGCTTTCATGGCCTATCTCCATTTCTAGGCGATCTTGCCAAGCTTCGAGGTATGTGGGAGGAATGCCGATCACAGTCTCGATCCAATGGAGAAATGACGAGACTTTTGGATGCCCTCTATGGGACAAACTTCGTGGAATTGGAATCCACGCCAAGCACATCACAGTTCTCATACGTGGGAGCTTCTGCATCATCTGTCGGTCATGATCAAGTTAACAATGCAAGACCAGCGGATTCCTTCTATTCTCTTTTAATTCAAATGAGAGAGAGCAGCAAAATAGACATATTGAAAGACAGAATACTACAGGGATGGAATAATGGTGGGTGGGGTGGTTCTCACCTACCTGGTGATCAGTATCCTGATTGGTTCATCTACAAAGGTGAAGGACATTCAGTAATTTTTAAGGTGCCTCAAGTCATAGGTTGTCACTTGAAAGCGATGCTTCTCAATGTTGTGTATTCTTCTTTCATGGATAACAGAAGCCCTCGATTTCTCATCATCAATGTTCTGATCATTAACTACACGAAGGCTTATGTTAAACACTGCAAGGGAGACTCGGCAACTTTCCATGTAGACACGGAATGGCAAAGTATCATTTCAAGTGTTCAACCTGGTGATCTGGTGGAGCTTGTTTTATATATTGGGCCTCAATTCCCTGTGAAGAAGATTGCAGCATACTTGATTTATGACAGTTCTAAGCGTCGTAGGTTATTGACCTAA 2664 0.3911 MCQTQNAFIMSEVELLDTIVKDVLEKVDAGQLFVAERPVGIESQVRKLTSKLSKKTLTKALIIGLWGMGGVGKTTVAKAFYNTIGRTFRRARSFLAQIRENSKHSNDLVNLQEQLISDIINTEVFKIPNVDRGIKILQERLPHIKAFIVLDDVDSVNQLNALCGSLEWFCPGSIIVITTRDLHLLSVIRADHKYKMETMNEIESLELFSWHAFKQKAPLENFIELSKNVVAYCGGLPLALEVLGSYLFDREIEEWEDVLSKLERIPNDEIQAKLKISFDGLKDDMEKNIFLDICCFFINKDRNYATHILNGCGFNAKIGITTLIERCLVNFNRKNNKLEMHDLLRDMGREIICGSPRKDLEDRSRLWFQEDVTEVLMQNTGTKVIEGISLKKPHEVCEIDAKAFKAMRKLRLLQLEYVNLEGDYRHLSNKLRWLCWPGFPLKSIPDSLYQKNLVAIDFKYSNLRLVWKKPQLLQCLTILILSHSPYLRQTPDFTNLPNLEKLVLKDCPSLKIVHQSIGDLKKIILVNLEDCKCLRVLPRSIYKLKSVKTLILSGCSLLDHLEEDIEQMESMTVLEADNTAITVVPKSLVRLEALKHGYVSFPGLKGRAQDVFPSLIWSWMSPTDIPQSSSEAFLLRMSSLVFSVVQNDGFHGLSPFLGDLAKLRGMWEECRSQSRSNGEMTRLLDALYGTNFVELESTPSTSQFSYVGASASSVGHDQVNNARPADSFYSLLIQMRESSKIDILKDRILQGWNNGGWGGSHLPGDQYPDWFIYKGEGHSVIFKVPQVIGCHLKAMLLNVVYSSFMDNRSPRFLIINVLIINYTKAYVKHCKGDSATFHVDTEWQSIISSVQPGDLVELVLYIGPQFPVKKIAAYLIYDSSKRRRLLT 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2149g00017 887 SUPERFAMILY L domain-like 333 663 - -
Pral2149g00017 887 PRINTS Disease resistance protein signature 62 77 - -
Pral2149g00017 887 PRINTS Disease resistance protein signature 140 154 - -
Pral2149g00017 887 PRINTS Disease resistance protein signature 542 558 - -
Pral2149g00017 887 PRINTS Disease resistance protein signature 233 247 - -
Pral2149g00017 887 Gene3D Ribonuclease Inhibitor 363 677 IPR032675 -
Pral2149g00017 887 Pfam NB-ARC domain 42 268 IPR002182 GO:0043531
Pral2149g00017 887 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 647 IPR044974 GO:0006952
Pral2149g00017 887 Gene3D - 198 282 IPR042197 -
Pral2149g00017 887 Gene3D - 23 194 IPR027417 -
Pral2149g00017 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 293 IPR027417 -
Pral2149g00017 887 Coils Coil 410 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2149g00017 Pral-Chr2149 92402 96520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2149g00017 39 559 WRKY Transcription Factor Family AT5G45050 30.952 4.38e-63 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2149g00017 - - pcin:129289419 1124.77