Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2149g00016 ATGGCTTCTTCTTCTTCTAGTTCTTCGCAGACTTACGACGTGTTCCTGAGTTTTAGAGGCGAAGACACTCGTCTTAATTTGACTGCTCATCTTTATAGTGCTCTAACACAGTCAGGAATCCATGTTTTTAGGGACGATGGAGGCCTTCAAAGGGGAGAAGAGATCTCCGCCTCATTATTGCAAGCAATTGAAAGATCAGGAATTGCGTTGGTAATTTTGTCTCCAGATTATGCATCTTCCAGATGGTGTCTGGATGAACTGCTGAGCATACTGGGGCGTCTAAGATCTGCAGCTCAGGTGGTTGTTCCCATATTCTATAACATAGATCCGTCTGAAGTTCGTCGTCAGAGAGGCACATATGGTGAAGCGATGGAACGACACCAGCAGAGGTTGGGAGGGGGCGGTGATCTCCGGGTGTTGCGCTGGAGGGAGGCACTCACGGAAATCAGCAATCTTTCCGGCTTTGATTCCAGAGCATTTCGGTCTGAAGTTGAGCTGATTGATACCATTGTGAAGGATGTTTTAGAGAAAGTAGATGCTGGACAATTGTTTGTTGCTGAGCATCCAGTGGGAATAGAGTCTCGAGTTCAGCAACTGGCAAGTAAATTGTCAAAAAAGAGATTTAGAAAAGCTCATATCATCGGCCTCTGGGGGATGGGAGGCGTTGGTAAAACTACTGTTGCCAAAGCCTTTTACAATACAATTGGTCGTACGTTTAGAAGAGCAAGAAGTTTTCTTGCGAAGATAAGAGAAAATTCAAAGCATTCTAATGACGTAGTTAATTTGCAAAAGCAACTCATTTCTGATATCATTAATACAGAAGTTTTCAAGGTACCTAATATTGATAGAGGGAAAAGAATAATTCAAGAAAGATTTCCCAACATAAAAGCATTTGTTGTATTGGATGATGTGGATAGTGTCAATCAGCTGAATACATTATGTGGAAGTCTTGAATGGTTTTGTCCTGAGAGTATAATAGTCATAACAACTAGAGATCTCCATCTGCTTAGTGTCATTAGAGCTGACTACAAGTATAGAATGAGAACGATGGATGAAATTGAGTCACTCGAGCTTTTTAGTTGGCATGCTTTTAAGCAAGAAGCTCCCCTTGAAAACTTCATAGAACTTTCTAAAAATGTAGTTGCTTACTGTGGTGGACTTCCTCTAGCTCTTGAAGTGCTTGGTTCTTATTTGTTTGACAGAAAAATTGAAGAATGGGAGGATGTCTTGTCCAAATTAGAAAGGATTCCGAATGATGAGATACAAGCAAAGTTAAAAATAAGTTTTGATGGTTTAAAGGATGATATGGAGAAGAATATATTTCTTGATATTTGTTGCTTCTTTTTCAATAAGGATAGAAACTATGCCACGCACATATTAAATGGATGTGGATTTAATGCAAAAATAGGTATAACAACCCTCATTGAGCGAAGCCTGATAAATGTTAATAGGAACAACAACAAGCTTGAAATGCATGACTTATTACGTGATATGGGAAGAGAAATCATTTGTGGAAACCCACGAAAGGACCCTGAGGATCGCAGTAGATTGTGGTTTCAAGAGGATGTAACTGAAGTGTTAATGCAAAATACAGGAACAAAAGTTATTGAGGGCATATCCCTGAAAAAGCCCCATGAAGTGTGTGAGATTGATTCTGAGGCATTCAAGGCAATGAGAAAACTCAGATTGCTCCAACTAGAGTATGTAAATCTTGAAGGAGATTATAGGCATCTTTCAAATAAGCTAAGGTGGCTTTGTTGGCGTGGATTTCCTTTAAAATCCATACCTGACAGCTTGTACCAGAAAAACTTAGTTGCTATTGACTTTAGATACAGCAAGCTCAGGCTAGTTTGGAAGAAACCCCAATTGTTGCAGTGTTTGACAATTCTCATTCTAAGCCATTCACCTCACTTGAGACAAACTCCTGATTTTACAAACCTACCAAACCTTGAAAAGTTAGTACTGAAAGATTGTCCAAGCCTAGTGTTAATTCACCAGAGCATTGGAGATCTGAAAAAAATTATTTTGGTAAATCTAAAAGACTGCAAATGCCTGAGGATTCTTCCTAGAAGCATCTACAAGTTGAAATCATTAAAAACTCTCATTCTTTCTGGTTGTTCATTGATTGACCATTTAGAAGAAGATATTGAGCAGATGGAATCCATGACAGTACTAAAGGCAGATCATACTGCCATAACAGTAATACCCAAGTCATTAGCAAGATTGGAAGCACTTAAGCATGGATATGTATCTTTCCTAGGCCTTGAAGGAAGAGCACCAGATGTATTTCCTTCTCTCATATGGTCTTGGATAATGGCAGATTTCATGGCCTATCTCCATTTTTGGGCGATCTTGCCAAGCTTCGAGGTGTGTGGGAAGAATGCCGATCACAGTCTCGATTCGATGGAGAAATTGCGAGACTTTTGGATGCCTTGTATGGGACAACCTTCATGGAATTGGAATCCACACCAAGCAGATCCGTGGAAGCTTCTACATCATTTGACGGTCATGATCAAGTTCAGAATGCAACATCGGTAG 2538 0.3987 MASSSSSSSQTYDVFLSFRGEDTRLNLTAHLYSALTQSGIHVFRDDGGLQRGEEISASLLQAIERSGIALVILSPDYASSRWCLDELLSILGRLRSAAQVVVPIFYNIDPSEVRRQRGTYGEAMERHQQRLGGGGDLRVLRWREALTEISNLSGFDSRAFRSEVELIDTIVKDVLEKVDAGQLFVAEHPVGIESRVQQLASKLSKKRFRKAHIIGLWGMGGVGKTTVAKAFYNTIGRTFRRARSFLAKIRENSKHSNDVVNLQKQLISDIINTEVFKVPNIDRGKRIIQERFPNIKAFVVLDDVDSVNQLNTLCGSLEWFCPESIIVITTRDLHLLSVIRADYKYRMRTMDEIESLELFSWHAFKQEAPLENFIELSKNVVAYCGGLPLALEVLGSYLFDRKIEEWEDVLSKLERIPNDEIQAKLKISFDGLKDDMEKNIFLDICCFFFNKDRNYATHILNGCGFNAKIGITTLIERSLINVNRNNNKLEMHDLLRDMGREIICGNPRKDPEDRSRLWFQEDVTEVLMQNTGTKVIEGISLKKPHEVCEIDSEAFKAMRKLRLLQLEYVNLEGDYRHLSNKLRWLCWRGFPLKSIPDSLYQKNLVAIDFRYSKLRLVWKKPQLLQCLTILILSHSPHLRQTPDFTNLPNLEKLVLKDCPSLVLIHQSIGDLKKIILVNLKDCKCLRILPRSIYKLKSLKTLILSGCSLIDHLEEDIEQMESMTVLKADHTAITVIPKSLARLEALKHGYVSFLGLEGRAPDVFPSLIWSWIMADFMAYLHFWAILPSFEVCGKNADHSLDSMEKLRDFWMPCMGQPSWNWNPHQADPWKLLHHLTVMIKFRMQHR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2149g00016 845 Gene3D Ribonuclease Inhibitor 520 770 IPR032675 -
Pral2149g00016 845 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 155 IPR035897 -
Pral2149g00016 845 SMART till_3 11 152 IPR000157 GO:0007165
Pral2149g00016 845 Gene3D - 349 433 IPR042197 -
Pral2149g00016 845 Coils Coil 561 581 - -
Pral2149g00016 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Pral2149g00016 845 Gene3D - 8 178 IPR035897 -
Pral2149g00016 845 Gene3D - 179 345 IPR027417 -
Pral2149g00016 845 ProSiteProfiles TIR domain profile. 10 178 IPR000157 GO:0007165
Pral2149g00016 845 PRINTS Disease resistance protein signature 291 305 - -
Pral2149g00016 845 PRINTS Disease resistance protein signature 693 709 - -
Pral2149g00016 845 PRINTS Disease resistance protein signature 213 228 - -
Pral2149g00016 845 PRINTS Disease resistance protein signature 384 398 - -
Pral2149g00016 845 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 180 - -
Pral2149g00016 845 SUPERFAMILY L domain-like 488 769 - -
Pral2149g00016 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 773 IPR044974 GO:0006952
Pral2149g00016 845 Pfam NB-ARC domain 193 419 IPR002182 GO:0043531
Pral2149g00016 845 Pfam TIR domain 12 178 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2149g00016 Pral-Chr2149 82646 86491 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2149g00016 7 742 WRKY Transcription Factor Family AT4G12020 28.818 7.96e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2149g00016 - - pcin:129287706 1028.47