Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2146g00010 ATGACCAAGAAACGCTTTTTCTTGTTTCGTTTCTTTACGATTCTGTTCATCATTTTCCCGCCATGTATGCCTGTAAGCGTAGAAACAGAGGCTCTCCTTCAGTTCAAGAAGCATTTGAAGGACCCTTTGGATTCTTTGGCTTCCTGGACAGATTCAGAGTCTCCCTGTGAATTCCATGGAGTTACTTGTGATAGATTTTCCGGGAAAGTCGTAGGAATTTCGCTGGAAAACAAGTCCCTTTCCGGGGAGATTTTCGCATCAATTTTTGCTCTCGAGAACCTCCGAGTTCTGTCACTCGCATCAAATTTTATTTCTGGGAAGCTTCCATTTGAAGTAAGCAACTGCAGCAACCTTAGAGTTTTGAACCTAACAGAAAATGATATGGTTGGGATTATCCCAGACTTGTCTGTGATGAGAAATCTCAAAGTTCTTGACCTCTCCGCAAACTACTTTTCCGGCGAATTCCCAAGCTGGGTCGGAAACCTGACTGGTCTCGTTTCGCTGGGGCTTGGGGAAAATGAATATATTGAGAGTGAAGTTCCTGAGACTCTTGGCAATCTGAAGAACTTGACTTGGCTCTATCTTGGTGGTTCTCATTTGAGAGGAGAGATTCCAGAATCAGTTTATGAAATGAAGGCTCTGGAGACACTGGATATCTCGAGAAACATGATCTCAGGGAAACTTTCCCAGTCAATTTGGAAGTTGGAAAATCTTCGTAAGATTGAGCTTTTCTCAAATACCTTAACTGGGAAAATCCCAGCTGAGCTGGCAAACTTGACCAAGCTTGAAGAGATTGACATTTCAATGAACCATTTATATGGCGAATTGCCAGAGGTGATCGGTACTATGGAGAATTTGGTTGTTTTTCAGCTCTATGAAAACAACTTTTCGGGAGAACTTCCTGCTGGGTTTGGAGATATGCAACATCTTGTTGGATTCTCAATCTATCGAAACAGCTTCTCTGGGAAAATTCCAGAAAATTTTGGCCGATTTTCACCACTGGATAGCATTGATATATCGGAGAATCAATTTTCAGGTGATTTTCCAAAGTTCTTGTGTGAAAACAGAAAATTGAAATTTTTGCTTGCTTTGCAAAATAATTTCTCCGGTGAATTGCCTGAGACTTATGTTACATGTAAATCAGTGGAGAGATTCAGGGTGAGCAGGAATCGCTTGTCTGGAAAAATTCCAAATGAGCTGTGGGCACTTCCATTTGTGAAGATAATTGATTTGGCTGACAATAATTTTGATGGCTCTATATCTCCAAAAATTGGGCTTTCCTCTAGCTTAAGCCAGTTAGTTCTAACAAAGAACAAGTTTTCGGGTAAGCTTCCTGCACAACTTGGTAAGCTGATGAATTTGGAGAAGCTATATTTGAGCAACAACAATTTTCATGGTGAAATACCAGCCGAAATTGGAGCTCTTAAGCAATTGTCTTCTTTTCATCTAGAAGAGAATGTATTAACTGGATCAATACCTGCGGAACTTTGTAATTGTACAAGGCTAGTGGACTTGAATGTTGCTCGGAATTTTCTAACTGGCACTATCCCTCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGCAACAAACTTACAGGCTCAATCCCAGAAAGCTTAGTGTCAATGAAATTGAGCTCGATTGATTTTTCCAAAAACCAGTTGTCTGGGAGAATTCCAAACAATCTTCTAATCATTGGTGGTGATGAAGCTTTTGTTGGAAACCCAGCACTTTGTGTTGAACAAAATTCAAAAACTCTAGTGAATTCCGAATTCAACATTTGTACAAGCATACATGGTCAGAAAAGGGTCTTCGCTGATAAGGTAGTAATTCTTTGCGTCACTGCTTCTGTCTTGGTTGTAGTGTTGGCCGTGTTGCTTGTGAGTTACGGAAGCATCAAGCATGAAAAAGCAGACCTGGAGAAAAACTTGCAAGATCAAAAGGAAACAGATTCAAAATGGAAAATTGCTTCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTAATTTGGATGAAGATAATTTGATTGGAACTGGTGGTACTGGAAAGGTATATCGAGTTGACTTGAAGAAAAATGGTTCCACGGTGGCTGTAAAACAACTATGGAAAGGAGATAGCGTAAAAATTTTGGCGGCAGAGATGGAGACTTTGGGAAAAATCAGGCATAGAAATATACTTAAGCTTTATGCTTCTTTGTTCAAAGGAGGATCAAACTACTTGGTGTTAGAGTTCATGCCAAATGGTAATCTTTTTCAAGCTCTTCACCGACAGATGAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCACTGGGCACTGCAAAAGGAATTGCCTATTTACATCATGATTGTTCTCCACCTATCATTCACAGAGACATAAAATCTAGTAACATTTTGCTGGATGAGGATTATGAGGCGAAAATTGCTGATTTTGGGGTTGCCAAATTTGCAGAAAGAACTGATCAACAGCTGGGTTTTAGCTGTCTTGCTGGCACTCATGGTTATATTGCTCCAGAGCTTGCTTACACACGCCAAGTTACTGAAAAGAGTGATGTGTATAGCTTTGGAGTGGTGTTGCTAGAATTACTTACAGGAAGGGAACCCATTGAGGAGGATTATGGAGAGGGGAAGGATATTGTATATTGGGCTATGACTAATCTGAATGCCCGTGAAAGCGCTATCAAGATCCTTGATGATAAAATAGCATCTGAGTCTGTTGAAGATGAAATGATTAAGGTCTTGAAGGTTGCTATCCAGTGCACAACTAAGCTCCCTTCTTTGCGTCCTTCTATGAGAGGTGTTGTCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAATCTCCTGAAAGCGATTTTGAGAAAGATAAGGATTTTACCTAG 2913 0.401 MTKKRFFLFRFFTILFIIFPPCMPVSVETEALLQFKKHLKDPLDSLASWTDSESPCEFHGVTCDRFSGKVVGISLENKSLSGEIFASIFALENLRVLSLASNFISGKLPFEVSNCSNLRVLNLTENDMVGIIPDLSVMRNLKVLDLSANYFSGEFPSWVGNLTGLVSLGLGENEYIESEVPETLGNLKNLTWLYLGGSHLRGEIPESVYEMKALETLDISRNMISGKLSQSIWKLENLRKIELFSNTLTGKIPAELANLTKLEEIDISMNHLYGELPEVIGTMENLVVFQLYENNFSGELPAGFGDMQHLVGFSIYRNSFSGKIPENFGRFSPLDSIDISENQFSGDFPKFLCENRKLKFLLALQNNFSGELPETYVTCKSVERFRVSRNRLSGKIPNELWALPFVKIIDLADNNFDGSISPKIGLSSSLSQLVLTKNKFSGKLPAQLGKLMNLEKLYLSNNNFHGEIPAEIGALKQLSSFHLEENVLTGSIPAELCNCTRLVDLNVARNFLTGTIPQSVSLMSSLNSLNLSGNKLTGSIPESLVSMKLSSIDFSKNQLSGRIPNNLLIIGGDEAFVGNPALCVEQNSKTLVNSEFNICTSIHGQKRVFADKVVILCVTASVLVVVLAVLLVSYGSIKHEKADLEKNLQDQKETDSKWKIASFHQVDLDVNEICNLDEDNLIGTGGTGKVYRVDLKKNGSTVAVKQLWKGDSVKILAAEMETLGKIRHRNILKLYASLFKGGSNYLVLEFMPNGNLFQALHRQMKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAERTDQQLGFSCLAGTHGYIAPELAYTRQVTEKSDVYSFGVVLLELLTGREPIEEDYGEGKDIVYWAMTNLNARESAIKILDDKIASESVEDEMIKVLKVAIQCTTKLPSLRPSMRGVVKMLIDAYSSPFQSPESDFEKDKDFT 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2146g00010 970 FunFam leucine-rich repeat receptor-like protein kinase TDR 751 959 - -
Pral2146g00010 970 Gene3D Transferase(Phosphotransferase) domain 1 755 966 - -
Pral2146g00010 970 Gene3D Ribonuclease Inhibitor 26 305 IPR032675 -
Pral2146g00010 970 SUPERFAMILY Protein kinase-like (PK-like) 672 948 IPR011009 -
Pral2146g00010 970 FunFam Receptor-like protein kinase HSL1 285 592 - -
Pral2146g00010 970 PANTHER OS05G0588300 PROTEIN 232 354 - -
Pral2146g00010 970 Gene3D Ribonuclease Inhibitor 309 593 IPR032675 -
Pral2146g00010 970 SUPERFAMILY L domain-like 52 345 - -
Pral2146g00010 970 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Pral2146g00010 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Pral2146g00010 970 Pfam Protein kinase domain 678 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2146g00010 970 SMART LRR_typ_2 523 547 IPR003591 -
Pral2146g00010 970 SMART LRR_typ_2 91 115 IPR003591 -
Pral2146g00010 970 SMART LRR_typ_2 187 211 IPR003591 -
Pral2146g00010 970 SMART LRR_typ_2 259 283 IPR003591 -
Pral2146g00010 970 SMART LRR_typ_2 451 475 IPR003591 -
Pral2146g00010 970 SMART LRR_typ_2 138 162 IPR003591 -
Pral2146g00010 970 ProSiteProfiles Protein kinase domain profile. 676 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2146g00010 970 CDD STKc_IRAK 682 948 - -
Pral2146g00010 970 Pfam Leucine rich repeat 139 200 IPR001611 GO:0005515
Pral2146g00010 970 SMART serkin_6 676 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2146g00010 970 Gene3D Phosphorylase Kinase; domain 1 675 754 - -
Pral2146g00010 970 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Pral2146g00010 970 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 26 175 - -
Pral2146g00010 970 Coils Coil 634 654 - -
Pral2146g00010 970 SUPERFAMILY RNI-like 252 565 - -
Pral2146g00010 970 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 176 252 - -
Pral2146g00010 970 FunFam Leucine-rich receptor-like protein kinase family protein 666 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2146g00010 Pral-Chr2146 291268 295498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2146g00010 13 951 Receptor kinase-like Gene Family AT1G72180 58.122 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2146g00010 Pkinase 9.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2146g00010 - - pcin:129322843 1690.63