Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2131g00002 ATGCCTTTCGGTTCGGCTGTTCTGCTTCTTCTTCTCCTCTTCTTCCTCTCCTGTGCTGGACTTTGTTTCTCTTCCGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGCATAAGAAATGCTCTGACTGACCCGCATGGAGTTTTAAGCAACTGGGATGAGAACTCGGTGGACCCTTGCAGTTGGGCTATGATCACCTGTTCTGCTGATTCACTTGTCATAGGCCTGGGAGCTCCTAGCCAGTCTCTTTCTGGAACTCTATCAGGAGCAATCGCAAATCTGACAAATCTTCGACAAGTTTTACTGCAGAACAACAATATCTCTGGCAAAATCCCACCTGAGCTTGGTGCCCTTCCTAAGCTTCAAACTCTTGATCTTTCCAATAATGGATTCACTGGGGCGATTCCAGGGTCTATGAGTCGGCTGAATAGTCTCCAGTACTTGAGGCTGAACAACAATAGTCTATCTGGCCCATTTCCTGTGTCACTGTCCAAAATCCCGCAGCTTTCTTTCTTAGACTTGTCTTACAACAATCTCAGTGGACCATTACCCGCGTCTCCAGCCAGAACATTCAACGTCGTGGGAAATCCCTTAATTTGTGGAAGCAGTTCTACTGAAGGTTGCTATCGATCAGCAACCCTCACACCTGCTCCTTTCACTCTAACACTGTCACAAGGAAATCACAAGTCCAAGAAGCTAGCAATTGCACTTGGAGTCAGTCTCAGCTTTGCTAGCATCATACTCCTGTCTTTTGGGATCTTATGGTACAGGAAGAGACTGCAGACCCAAGCCATCCTACACATCAATGATTGTCAAGAAGAGGGGCTTGTTAGATTGGGAAATCTCAAAAGTTTTACTTTTAGAGAGCTCCAACATGCAACAGATAATTTCAACTCCAGGAACATACTTGGTGCGGGAGGTTTTGGCAATGTTTATCAGGGGAGGCTTGGAGATGGGACAATGGTGGCAGTGAAAAGGCTGAAGGATGTAAGTGGAGGTGCTGGTGAATTGCAGTTTCGAACAGAACTGGAGTTGATCAGCTTGGCAGTTCACCGTAATTTACTTCGTTTGATTGGATTTTGTGCTACACCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTGGCTTCGAGGCTTAGAGGCAAACCTTCTTTGGATTGGAACACAAGAAAGAGGATAGCCATTGGAGCCGCGAGAGGTCTTCTATATCTTCATGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCTGCTAATGTGCTTCTGGATGACTATTTTGAGGCTGTTGTAGGTGATTTTGGGCTTGCAAAACTCCTTGACCATGATGTCTCTCATGTCACAACTGCTGTCCGTGGCACCGTGGGCCACATTGCACCAGAATACCTCTCCACTGGCCAATCTTCAGAGAAAACTGATGTATTTGGATTTGGCATTCTGTTGTTAGAGCTTATGACTGGAATGACAGCCCTTGAGTTTGGGAAAACAGTTAATCAAAAGGGCGCTATCCTGGAGTGGGTTAAGAAAATACAGCATGAAAAGAAACTTGAAGTATTGGTAGACAAAGGGCTAGGTAGTCACTGTGACTGGATAGAGGTGGGAGAGATGTTACAAGTAGCTTTACTCTGTACTCAATATTTGCCAGCCCACCGCCCTAAAATGTCTGAAGTGGTCCGGATGCTCGAAGGCGATGGCCTCGCAGAGAAATGGGCGGCATCACATAATCATGGTGGCCTTAGCATGAACTCCTTTCACAGCAACAGCAACAACAGTTCATCATCCCGTCCTACCACCACTGCGCCAAATTCAAAACATGATGACCACGCTCATGATCGTTCCCACATGTTTGGCATGGCAGTGGATGATGATGATGATGTACATTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCAAGATGA 1938 0.4587 MPFGSAVLLLLLLFFLSCAGLCFSSEPRNHEVEALMSIRNALTDPHGVLSNWDENSVDPCSWAMITCSADSLVIGLGAPSQSLSGTLSGAIANLTNLRQVLLQNNNISGKIPPELGALPKLQTLDLSNNGFTGAIPGSMSRLNSLQYLRLNNNSLSGPFPVSLSKIPQLSFLDLSYNNLSGPLPASPARTFNVVGNPLICGSSSTEGCYRSATLTPAPFTLTLSQGNHKSKKLAIALGVSLSFASIILLSFGILWYRKRLQTQAILHINDCQEEGLVRLGNLKSFTFRELQHATDNFNSRNILGAGGFGNVYQGRLGDGTMVAVKRLKDVSGGAGELQFRTELELISLAVHRNLLRLIGFCATPNEKLLVYPYMSNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYFEAVVGDFGLAKLLDHDVSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELMTGMTALEFGKTVNQKGAILEWVKKIQHEKKLEVLVDKGLGSHCDWIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHNHGGLSMNSFHSNSNNSSSSRPTTTAPNSKHDDHAHDRSHMFGMAVDDDDDVHSLDSYAMELSGPR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2131g00002 645 FunFam Somatic embryogenesis receptor-like kinase 1 374 585 - -
Pral2131g00002 645 FunFam Putative LRR receptor-like serine/threonine-protein kinase 28 210 - -
Pral2131g00002 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Pral2131g00002 645 Pfam Protein tyrosine and serine/threonine kinase 300 566 IPR001245 GO:0004672|GO:0006468
Pral2131g00002 645 MobiDBLite consensus disorder prediction 586 629 - -
Pral2131g00002 645 SMART serkin_6 297 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2131g00002 645 FunFam Somatic embryogenesis receptor kinase 1 266 373 - -
Pral2131g00002 645 ProSiteProfiles Protein kinase domain profile. 297 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2131g00002 645 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 577 - -
Pral2131g00002 645 MobiDBLite consensus disorder prediction 606 629 - -
Pral2131g00002 645 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Pral2131g00002 645 SUPERFAMILY Protein kinase-like (PK-like) 280 567 IPR011009 -
Pral2131g00002 645 Gene3D Phosphorylase Kinase; domain 1 267 373 - -
Pral2131g00002 645 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pral2131g00002 645 SUPERFAMILY L domain-like 28 196 - -
Pral2131g00002 645 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Pral2131g00002 645 Gene3D Transferase(Phosphotransferase) domain 1 374 584 - -
Pral2131g00002 645 MobiDBLite consensus disorder prediction 586 605 - -
Pral2131g00002 645 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Pral2131g00002 645 PRINTS Leucine-rich repeat signature 166 179 - -
Pral2131g00002 645 PRINTS Leucine-rich repeat signature 121 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2131g00002 Pral-Chr2131 3034 7885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2131g00002 8 512 Receptor kinase-like Gene Family AT2G23950 75.050 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral2131g00002 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2131g00002 - - jre:108989515 974.156