Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2129g00004 ATGCCAACAGTTTGGTTCTCTCTCAAGAGGTCTCTACACTGCAAATCAGAGCCATCAGAAGTTCATGACCCGAAATCTAGAAAGCATTTGAGCACAATCTTAACGAAAAGGGCTGGTAGGTCTGGGTGCTCGAGGAGCATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAGAGGCATCTCGAGAAGCCACCAAGTTGCAGTCCAAGATCCATTGGGAGCAGTGAGTTTCTCAACCCAATAACCCACGAAGTGATTTTAAGTAACTCAAGGTGTGAGCTCAAAATCACTGGTTTTGGTGGATTCCAAGATGGGGTTGGCGGCGGCGGCGGCGGCGCTGCTAACGGCGGTGGAGGCGGAGGCGGAGGCGGTGGTAATAATGGTGGTGGTGGTGGTGGTTCTACCTTTGTGGGTACTTTACGGCCTGGGACTCCGGGACCCGGAGGACACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACATCAACCACTCCTCCAAGGAAATCTCCGAGTCCTTTTGTTACATCAGAAAAAGAAGGGTCTGCATTGCATGGTGGTGGGGGGCTTCATTCTAGCAATAGGATGTCTCTTGAGACTGATTCTAATGGCTGTTCCACTGTCACTTGTCACAAATGCGGAGAGCAATTTACGAAATGGGAAGCTGCTGAAACTCATCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGCGATTCATCGAGAAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAGTCCGAGAATCACTGTGGCCGAATAGAGAGAGTGTTGAAGGTCCACAACATGCAAAAGACTCTGGCTCGATTCGAAGAGTACAGAGAGATGGTAAAAATCAAAGCTAGCAAACTCCCAAAGAAACATCCTCGGTGTCTTGCTGATGGGAACGAGCTTTTGAGGTTCTATGGCACGACGGTGTCCTGCAATCTTGGTCTCAACGGCTCATCCAGCCTATGCCTCTCAGAAAAATGCTGTGTTTGTCGAATTATCAGAAATGGGTTTTCTGCAAAGAAGGAGCTCAAGGGTGGAATAGGAGTTTTTACAACTTCCACAAGCGGAAGAGCATTTGAATGTATTGAGATCCTTGATGATGACATTTCAATCAGAAAAGCACTCATTGTTTGCAGAGTAATAGCTGGCAGAGTTCATAGGCCACTCGAGAACATACAAGAAATGGCAGGGCAAACAGGTTTTGATTCTTTGGCCGGCAAAGTTGGTCTCTATTCAAACATAGAGGAGCTTTATTTGCTCAATCCTAAAGCCCTTCTTCCTTGCTTTGTCGTAATCTGCAAGCCCTGA 1329 0.4688 MPTVWFSLKRSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQDGVGGGGGGAANGGGGGGGGGGNNGGGGGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSTTPPRKSPSPFVTSEKEGSALHGGGGLHSSNRMSLETDSNGCSTVTCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTTVSCNLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFECIEILDDDISIRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2129g00004 442 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 440 - -
Pral2129g00004 442 SUPERFAMILY ADP-ribosylation 233 441 - -
Pral2129g00004 442 ProSitePatterns Zinc finger C2H2 type domain signature. 210 231 IPR013087 -
Pral2129g00004 442 MobiDBLite consensus disorder prediction 156 177 - -
Pral2129g00004 442 FunFam C2H2-like zinc finger protein 232 441 - -
Pral2129g00004 442 Gene3D - 223 441 - -
Pral2129g00004 442 MobiDBLite consensus disorder prediction 125 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2129g00004 Pral-Chr2129 47783 50248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2129g00004 1 442 C2H2 Transcription Factor Family AT5G54630 65.823 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral2129g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2129g00004 - - qsu:112024963 699.123