Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2125g00004 ATGGCGAAGTCATCATCGTGCAGCGAGCAACTAGCAGAGTTGAAGAAAGGGCCATGGACTCCCGAGGAAGACCAGAAGCTCATGTCTTACATTCAACTACACGGCCATGGAAGCTGGTCTTCCTTTCCTGCAAGAGCTGGACTCCGAAGATGTGGGAAGAGCTGCAGATCACTGAGATGGATTAATTATCTAAGACCTGACATCAAACGAGGCAACTTCAGCTCGCAGGAAGATCAAACCATTATTCAACTTCATGCTCTTGTTGGAAACAAATGGTCGGTGATAGCACGTCACCTGCCAAAGAGAACGGACAACGAGATCAAGAACTACTGGAACACCAACCTTAAGAAGAGGCTCGCCGGAATGGGTATCGACCCCACCACACACAAGCCCATCAACGACGCCACCAACCTCAGCCATATGGCTCAGTGGGAGACTGCTCGGCTCCAAGCCGAAGCCAGGCAACTCAAAGAATATTCTGAGCTTCAGATCCAGAACCAGCTCGCCTCCTTCTCCTCTTCTCAGACACGGCTCAATTCACGGTCGTCCGCCACATCGAATCCCTCAAAAGAGAACACCCCCAGAATGCATAGCATGTACGCCATGATGCTCGCCACCGACGACCTGGAGTCGCCGGCGTCCACGTTGAGCTTCCCGGACACTGTCCCTGCCAACTCCAAATGTACTGATAGTAACACTTTCTTGGGGCTGATCAATCAAAGTTCACTTCCATCCGCCACCGTCGTCGCAAATGACAATGGAGTCATTCTGAATGAAGCATGTGGAGACAAAGTACGAAGTGTGGGGGGCGAAGACAATATTATGGCAGCCTTGGAAGCATTCAGATCAACACGATGCAACTATAATGACGATGTGTTGGTGTACGGATTTAATGAGATGGCACCACAACAAAACCTGGGAGTGGGGGATGATTGGGAAGCCATTCTTAACCTCGTCAGTTCGCCCCCATCCCCTGGAAGTATTTGGTCTTTTGCAGATTAG 1002 0.505 MAKSSSCSEQLAELKKGPWTPEEDQKLMSYIQLHGHGSWSSFPARAGLRRCGKSCRSLRWINYLRPDIKRGNFSSQEDQTIIQLHALVGNKWSVIARHLPKRTDNEIKNYWNTNLKKRLAGMGIDPTTHKPINDATNLSHMAQWETARLQAEARQLKEYSELQIQNQLASFSSSQTRLNSRSSATSNPSKENTPRMHSMYAMMLATDDLESPASTLSFPDTVPANSKCTDSNTFLGLINQSSLPSATVVANDNGVILNEACGDKVRSVGGEDNIMAALEAFRSTRCNYNDDVLVYGFNEMAPQQNLGVGDDWEAILNLVSSPPSPGSIWSFAD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2125g00004 333 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Pral2125g00004 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 217 - -
Pral2125g00004 333 CDD SANT 72 115 IPR001005 -
Pral2125g00004 333 Gene3D - 72 143 - -
Pral2125g00004 333 MobiDBLite consensus disorder prediction 170 194 - -
Pral2125g00004 333 ProSiteProfiles Myb-like domain profile. 11 56 IPR001005 -
Pral2125g00004 333 Pfam Myb-like DNA-binding domain 16 64 IPR001005 -
Pral2125g00004 333 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Pral2125g00004 333 FunFam MYB-related transcription factor 15 69 - -
Pral2125g00004 333 FunFam MYB transcription factor 71 132 - -
Pral2125g00004 333 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Pral2125g00004 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Pral2125g00004 333 SMART sant 15 66 IPR001005 -
Pral2125g00004 333 SMART sant 69 117 IPR001005 -
Pral2125g00004 333 Gene3D - 13 70 - -
Pral2125g00004 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 64 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2125g00004 Pral-Chr2125 135526 136878 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2125g00004 1 222 MYB Transcription Factor Family AT3G01140 54.583 3.78e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2125g00004 Myb_DNA-binding 7.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2125g00004 K09422 - gmx:100809025 300.827