Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2122g00007 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCCTGGGGTGGAAGGCTCAATTCCGAAGCCTCCTACGACAGAAAGAAAGGCGAGGCCTCAGAAAGATCAAGCTCTGAACTGCCCGCGGTGCAACTCAACCAACACTAAATTCTGCTACTACAATAACTATAGCCTCTCTCAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACCGAAGGTGGGTCCCTGAGAAATGTTCCCGTGGGTGGAGGCTCCCGAAAGAACAAGAGACCTTCAACTTCTTCATCTTCATCCTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGCCCACCACCAGCACCCGAGGACTACAACAATAGCATATCAAAATTTATCGAGGTTCCTTTTAATACTGAAGACAAGAGTATAGCTTCTCATCACGATCAGTTATCCTCGATGGAGCTTCTGAGAACTGGAATTCCGTCGTCAAGGACTCTGTGTTCTTTGATGCCTATGTCGGCGTCGGATTCTTCCGGTTCAGCAATGTATAATTCGAGTGGATTTCCTAGTTTGCAAGATCTTAAGCCTCCTCCAGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATGGGTACGGGGGTATTTCTGGAATGCACGAGGGAAGTAGTGGCGATGGCAGTGCGAGGTTGTTGTTCCCTACTGAGGATTTGAAGCAAGTTCCAAGTAGTACTGATCATTATGAGCAGAATAGAAGCCATGCGGATTCAACGGGGTTTTGGAATGGCATGTTAGGTGGAGGATCGTGGTAA 828 0.4783 MDTAQWAQGIGVVKQPGVEGSIPKPPTTERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSTSSSSSSKKLPDLNPKIQQGQDLNLACPPPAPEDYNNSISKFIEVPFNTEDKSIASHHDQLSSMELLRTGIPSSRTLCSLMPMSASDSSGSAMYNSSGFPSLQDLKPPPGLSFSLEGFANGYGGISGMHEGSSGDGSARLLFPTEDLKQVPSSTDHYEQNRSHADSTGFWNGMLGGGSW 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2122g00007 275 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Pral2122g00007 275 MobiDBLite consensus disorder prediction 1 37 - -
Pral2122g00007 275 MobiDBLite consensus disorder prediction 91 117 - -
Pral2122g00007 275 MobiDBLite consensus disorder prediction 81 126 - -
Pral2122g00007 275 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Pral2122g00007 275 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Pral2122g00007 275 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 179 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2122g00007 Pral-Chr2122 25835 27323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2122g00007 30 275 C2C2-Dof Transcription Factor Family AT3G61850 47.191 1.19e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral2122g00007 zf-Dof 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2122g00007 - - gmx:778114 332.413