Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2120g00009 ATGGAACCAATCAATAGATGCTCTTCTTCCGCTTCTTCTTCTGATGACTCTTCCACTTCCGGCTCTTCCTTCTCCAGCAACCCCCACAGGAATCACGACAATCCCGACAGAATCAAAGGCCCCTGGAGCGCCGAAGAAGACCGGATTCTGACCCGACTCGTTGAACGATATGGGCCCCGAAACTGGTCCTTGATTAGTCGCTACATTAAGGGAAGGTCCGGCAAGTCCTGCCGCCTGAGATGGTGTAACCAGTTGAGCCCCAGCGTGGAGCACCGTCCATTTTCCCAACAGGAGGACGACACCATCATAGCGGCTCATGCTCAGTACGGTAACAGGTGGGCCACCATCGCCCGGCTGCTCCCGGGTCGGACCGATAATGCCGTGAAGAACCACTGGAACTCCACGCTCAAGAGAAGGGTGAAGGAGCAGCGTGCGGCGGAGGGCGGAGGTGCTGGTGTTGCCAACGACAGGGTTCTTGGTTCTCCCGGATCTGTCCAGCCCTGCATGGGATTAGAAATGGACAATGACCCGCTGACGGCGTTGACTCTGGCGCCGCCTGGAGCTAACGTGGCCGCGGCTGAACGCCAGCCAAGTCCGGGGAACGTGCCGGCGGGGTTCTGGGATGTGATGAGGGGTGTGATAGCGAGAGAAGTCAAAGAGTATGTTTCTTCCACGTTTTCTGAGAACCCAGGCTTCCATTAA 702 0.5726 MEPINRCSSSASSSDDSSTSGSSFSSNPHRNHDNPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSQQEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVKEQRAAEGGGAGVANDRVLGSPGSVQPCMGLEMDNDPLTALTLAPPGANVAAAERQPSPGNVPAGFWDVMRGVIAREVKEYVSSTFSENPGFH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2120g00009 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 140 IPR017930 -
Pral2120g00009 233 SMART sant 90 138 IPR001005 -
Pral2120g00009 233 SMART sant 38 87 IPR001005 -
Pral2120g00009 233 MobiDBLite consensus disorder prediction 1 42 - -
Pral2120g00009 233 ProSiteProfiles Myb-like domain profile. 34 85 IPR001005 -
Pral2120g00009 233 Gene3D - 38 90 - -
Pral2120g00009 233 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Pral2120g00009 233 PANTHER MYB PROTEIN-RELATED 39 176 - -
Pral2120g00009 233 MobiDBLite consensus disorder prediction 1 29 - -
Pral2120g00009 233 CDD SANT 41 83 IPR001005 -
Pral2120g00009 233 Gene3D - 92 149 - -
Pral2120g00009 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 89 IPR017930 -
Pral2120g00009 233 SUPERFAMILY Homeodomain-like 36 132 IPR009057 -
Pral2120g00009 233 CDD SANT 93 136 IPR001005 -
Pral2120g00009 233 FunFam MYB transcription factor 39 90 - -
Pral2120g00009 233 Pfam Myb-like DNA-binding domain 42 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2120g00009 Pral-Chr2120 61352 62418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2120g00009 26 152 MYB Transcription Factor Family AT4G37260 70.543 1.66e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2120g00009 Myb_DNA-bind_6 2.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2120g00009 - - jre:109010305 321.242