Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2120g00001 ATGTTCACTGCCTCTCAGTCACACCCAGTAATGCGAAGCTTCACACCTTTCCCGGACCTTTCTTTGAATATCAGCCCTCCAGATTGTAAAGCGAAACAAGTCGAGAGTCACACTAAGGGATTCGCAACCAAAAGGCCTCACAGTGATATGTGCTCCACCTCCGATTCTGGAAGCAGCGAGAGTGATTTAAGCCATGAAAATGCCTTTTCGCACCTTGGCTATCGTGAGCCTACTTTGAGCTTAGGCATCAAAATGGCAGATTTGAATCCCCTTCCACTCCCAAGAAACGTGAATCACTTTCACAACCCGCAACCTCACATCTATGGTCGCGACTTTAAACGAAACACCAGAGTCGTCTGCGGTGTGAAAAGGAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCTTACATGCCCATTTTGTTCATGCTGTTCAACTTCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGTTAGAGTTGATGAATGTAAAAGATTTAACCCTAGCACACGTTAAGAGCCACCTACAGATGTATAGAACAGTGAAAAGCACTGCCAAATGCACAGGTCATGGCCACACTGATATGGGATTAGCCGTTGTCGCTGAGCATGGAGCAGCCTCAGCTTGTGAGAGAACCCATCTACCTCTGCCACTTCAAAGATCTCACAACAACAAGGAATCATGGCAATCATCAACGGAGACAAGGACAAACGATAGTAGACAAAAACCAGGAACGAGTTTGACGTATTCTCAAGTGAAGGCAAACGAAAGCATGGTGGTTGGAAGGTCATTGTCAGATTCTTCAGATGAGACGCTTAACCTAGAATTCACCCTTGGAAGACCCAGTTGGAACACAGACCAGACTCAATCATCAACAGACTTAACTTTTCTCAACTGTTAA 906 0.4592 MFTASQSHPVMRSFTPFPDLSLNISPPDCKAKQVESHTKGFATKRPHSDMCSTSDSGSSESDLSHENAFSHLGYREPTLSLGIKMADLNPLPLPRNVNHFHNPQPHIYGRDFKRNTRVVCGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTAKCTGHGHTDMGLAVVAEHGAASACERTHLPLPLQRSHNNKESWQSSTETRTNDSRQKPGTSLTYSQVKANESMVVGRSLSDSSDETLNLEFTLGRPSWNTDQTQSSTDLTFLNC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2120g00001 301 Pfam Myb-like DNA-binding domain 130 181 IPR001005 -
Pral2120g00001 301 MobiDBLite consensus disorder prediction 219 248 - -
Pral2120g00001 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 129 182 IPR006447 GO:0003677
Pral2120g00001 301 MobiDBLite consensus disorder prediction 216 248 - -
Pral2120g00001 301 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 289 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral2120g00001 301 SUPERFAMILY Homeodomain-like 126 183 IPR009057 -
Pral2120g00001 301 Gene3D - 128 185 - -
Pral2120g00001 301 MobiDBLite consensus disorder prediction 31 64 - -
Pral2120g00001 301 FunFam Myb family transcription factor 127 185 - -
Pral2120g00001 301 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2120g00001 Pral-Chr2120 1797 5207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2120g00001 6 196 G2-like Transcription Factor Family AT5G42630 57.732 1.22e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral2120g00001 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2120g00001 - - gmx:100778242 296.975