Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral211g00001 ATGGGTAGGTCACCTTGCTGTGAGAAAGTGGGGTTGAAGAAAGGGCCATGGACTCCCGAAGAAGACCAGAAGCTCATCGCTTACATTGAACAACACGGCCATGGAAGCTGGCGTGCTTTGCCTTCCAAAGCTGGACTTGAGAGATGTGGGAAAAGTTGCAGACTGAGGTGGACTAATTATCTCAGACCTGATATCAAACGAGGAAAGTTCAGCTTGCAAGAAGAGAGAACCATTATTCAGCTTCATGCTCTTCTTGGAAACAGATGGTCAGCCATAGCGGCTCATTTGCCTAAGAGAACGGACAATGAAATTAAGAACTATTGGAACACTCATCTGAAGAAGAGGCTCGCGAGAATGGGAATCGACCCGGCCACTCACCGGCCCAAAGTTGACGCCGGCGGTGGCCCGGCTAGCTCCAGCCTTAGCCACATGGCTCAGTGGGAGAGTGCGCGGCTTGAAGCCGAAGCCAGGCTAGTCAGAGAAATCTCGGCTCGGCAGTCCGTTCCGCCGTGCCTAGACGTCCTCAAAGCATGGCGAAACTCATGGTCATCGTTGCCGACAGCAGAAGACAAAAATGCCAGAATGCATAACATGTACGCCTTGATGCTCGCCGCAGCTGACGACGATCTCGAGTCGCCGACGTCCACCTTGAGCTTCCCAGAACCGATGTTACCACTTAGCTCCCCCAACACCACCACCACCAACGTAGGAATATCACCTGAAAAAGTCGTCATCCCTCCGCTCACAACCACCACCATGGCTAATTCTCTCGCCGCAGCCACTTCAGGAATGGAGCCATGGGACACGGCGGCGATGATCGGAGAAAGAACAACAACGACAAACTTACAAGACGACGACATTATGGTGGCGGTGGAGGCATTTATGGGGGAAAGGTACAAGAATGTGCAAGAAGTACTGTCATCAAACAGTAAAATGGAAGGCTTAAACGGCGCAGATAATGATGATGTGATTGTTTTTGAATCCAGTGAGAACATGGACAACTTGGGTTTCGTCGATATTAATGGCGAATCAAGCATGATGATTTGTGGAAACACAAACTTTGAGGACAAGAATCATTACTGGAACAGCATATGTAGTGCCCAGACTTGGTGA 1113 0.5022 MGRSPCCEKVGLKKGPWTPEEDQKLIAYIEQHGHGSWRALPSKAGLERCGKSCRLRWTNYLRPDIKRGKFSLQEERTIIQLHALLGNRWSAIAAHLPKRTDNEIKNYWNTHLKKRLARMGIDPATHRPKVDAGGGPASSSLSHMAQWESARLEAEARLVREISARQSVPPCLDVLKAWRNSWSSLPTAEDKNARMHNMYALMLAAADDDLESPTSTLSFPEPMLPLSSPNTTTTNVGISPEKVVIPPLTTTTMANSLAAATSGMEPWDTAAMIGERTTTTNLQDDDIMVAVEAFMGERYKNVQEVLSSNSKMEGLNGADNDDVIVFESSENMDNLGFVDINGESSMMICGNTNFEDKNHYWNSICSAQTW 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral211g00001 370 CDD SANT 69 112 IPR001005 -
Pral211g00001 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pral211g00001 370 FunFam MYB transcription factor 69 116 - -
Pral211g00001 370 CDD SANT 16 61 IPR001005 -
Pral211g00001 370 MobiDBLite consensus disorder prediction 212 237 - -
Pral211g00001 370 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral211g00001 370 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral211g00001 370 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral211g00001 370 Gene3D - 69 116 - -
Pral211g00001 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 220 - -
Pral211g00001 370 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral211g00001 370 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral211g00001 370 FunFam MYB-related transcription factor 13 66 - -
Pral211g00001 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral211g00001 370 SMART sant 66 114 IPR001005 -
Pral211g00001 370 SMART sant 13 63 IPR001005 -
Pral211g00001 370 Gene3D - 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral211g00001 Pral-Chr211 7696 9837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral211g00001 1 229 MYB Transcription Factor Family AT3G01140 64.167 1.44e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral211g00001 Myb_DNA-binding 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral211g00001 K09422 - gmx:100799222 394.815