Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2119g00015 ATGGAGCAGGAACACGAAGAGCATGAAGTGTACGGAGGCGATATTCCCGACGACGCGGAGATGGACGCAGATTTCAGAGTTGATGAAGAAGAAGACCAAGAAGGACATCAACATGACCCCGATCAGTCTAATAAGGACCTGGAGGACATGAAGAAGCGGCTCAAGGAAATCGAGGAAGAAGCTAGTGCCCTTCGTGAAATGCAGGCTAAGGTTGAGAAAGAGATGGGTGCTGTTCAAGATTCAAGTGGTTCTTCTGCAAGTCAAGCTGAGAAGGAGGAAGTGGATTCCCGGTCAATCTATGTTGGTAATGTTGACTATGGATGTACACCTGAAGAAGTCCAGCAACATTTTCAGTCTTGTGGAACTGTGAACAGAGTGACAATATTGACAGACAAATTTGGTCAACCAAAAGGATTCGCTTATGTCGAGTTTGTTGAGGTTGATGCCGTTCAGAATGCTCTCTTGTTGAATGAATCAGAGTTGCATGGTCGTCAATTGAAGGTCTCTGCTAAGCGTACAAACGTTCCTGGAATGAAGCAGTATCGTGGAAGAAGACCTATGGGTTTTCGACCTAGAATGCCTTACATGCCTTCTCCATTCTATCCTCCATATGGTGGTTATGGGAGGTTTCCGAGGTATAGGCGTCCGACACGTTACAGGCCATACTAG 669 0.4619 MEQEHEEHEVYGGDIPDDAEMDADFRVDEEEDQEGHQHDPDQSNKDLEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGSSASQAEKEEVDSRSIYVGNVDYGCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPMGFRPRMPYMPSPFYPPYGGYGRFPRYRRPTRYRPY 222
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral2119g00015 222 CDD RRM_II_PABPs 98 169 - -
Pral2119g00015 222 MobiDBLite consensus disorder prediction 1 15 - -
Pral2119g00015 222 Coils Coil 40 74 - -
Pral2119g00015 222 MobiDBLite consensus disorder prediction 30 73 - -
Pral2119g00015 222 Gene3D - 17 180 IPR012677 -
Pral2119g00015 222 MobiDBLite consensus disorder prediction 1 96 - -
Pral2119g00015 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 167 IPR000504 GO:0003723
Pral2119g00015 222 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 173 IPR000504 GO:0003723
Pral2119g00015 222 SUPERFAMILY RNA-binding domain, RBD 87 199 IPR035979 GO:0003676
Pral2119g00015 222 SMART rrm1_1 98 169 IPR000504 GO:0003723
Pral2119g00015 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 21 207 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral2119g00015 Pral-Chr2119 116837 125415 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2119g00015 98 169 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 3.00e-09 54.7