Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2119g00009 ATGGTCACAAAAGCAACTAGCAGCTCCGCCATCGCGGCGGCTGTATTTATGGTGGCCGCTCTGATCACCGCCGTCCTCTCTGACGACATGCTTCCAGTTCCCGGCGACAAGTCCCAACTTACGAAATGGTTCAACGACAACGTGAAGCCACTGTCGTCGTCACGGATTGAAATGAATAATAATAAGGGCCTAAGAATAATAAACCCTAAACTTGCAGCTGCAGAAAAACGAGTGAAGGTGGTGAAGGTGAAGAAAGATGGAAGCGGAGACTTCAAGACGGTGTCAGACGCCATTAAAGCCATCCCTGAAGGTAACAGGAGGAGAGTGATAGTGTATGTTGGAAGTGTGACTTACTTTGAGAAGATAAAGATAGAGAAGACGAAGCCTTTTGTAACTCTGTTTGGTGATCCTAAGAATTTCCCAAACTTGACCTTCGATGGAACTGCACAAAGATTTGGAACTGTGGATAGTGCTTCCTTGATTGTTGAATCCGACTATTTCGTTGTTGCCAATCTCGTTATTTCGAACTCGGCACCGATGCCTGACGGGAGAAGGGAGGGAGCTCAGGCGGTGGCGCTGCGAGTTTCCGGCAACAATTCGGCATTCTACAACTGCGTGCTATTAGGGTTTCAAGACACACTCTGTGACGATAGGGGAAACCATTTGTTCAAGGACTGCACAATCCAAGGCACAGTGGACTTCATATTTGGGAGTGGCAAGTCCTTGTACTTGAACACGAAGCTCATCGTGGTGGGGACAGTCGGCGGCGTGATCGCGGCTCAGGCGAGGGAGAGCGACGACGACACCATCGGCTATTCCTTTGTTCACTGCGACATAAGTGGCACCGCCAGTGGCACCTTCTTGGGAAGAGCCTGGATGGCTTATGGCAGAGTTGTGTACGCTTATAGCACCATTAGCAACATTATTACTCCTCTTGGTTGGAACATTAACAACCATCCTGCTATGGCCCAGACTGTATATTTTGGAGAGTACCAGAATAGTGGAGATGGTGCAAATACAAAAGGACGAGCCCCGTTCACAAAGATACTAAATGACGCTGATGCGAAGCAATTCATCTCTCTTGGCTTCATTGAAGCTTCTAAGTGGCTGCTTCCTCCTCCTCAAGCCTAA 1131 0.4854 MVTKATSSSAIAAAVFMVAALITAVLSDDMLPVPGDKSQLTKWFNDNVKPLSSSRIEMNNNKGLRIINPKLAAAEKRVKVVKVKKDGSGDFKTVSDAIKAIPEGNRRRVIVYVGSVTYFEKIKIEKTKPFVTLFGDPKNFPNLTFDGTAQRFGTVDSASLIVESDYFVVANLVISNSAPMPDGRREGAQAVALRVSGNNSAFYNCVLLGFQDTLCDDRGNHLFKDCTIQGTVDFIFGSGKSLYLNTKLIVVGTVGGVIAAQARESDDDTIGYSFVHCDISGTASGTFLGRAWMAYGRVVYAYSTISNIITPLGWNINNHPAMAQTVYFGEYQNSGDGANTKGRAPFTKILNDADAKQFISLGFIEASKWLLPPPQA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2119g00009 376 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 370 - -
Pral2119g00009 376 ProSitePatterns Pectinesterase signature 2. 228 237 IPR033131 -
Pral2119g00009 376 Pfam Pectinesterase 81 366 IPR000070 GO:0030599|GO:0042545
Pral2119g00009 376 Gene3D - 76 372 IPR012334 -
Pral2119g00009 376 FunFam Pectinesterase 76 372 - -
Pral2119g00009 376 SUPERFAMILY Pectin lyase-like 80 370 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2119g00009 Pral-Chr2119 47455 54368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2119g00009 25 374 Carbohydrate Esterase AT1G69940 51.714 9.04e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2119g00009 K01051 - gmx:100813174 433.721