Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2118g00009 ATGTATACCTGCCGGCTCGTATTTTCCAAATATTATATCATCCATCAACAAGGGATCCTCGTTCTCTGCTACATTACAAAGGTTCTCATTGTGGAATTAGCCAATCTGACTCATTCTAGTTCCGGCAACAATAACTTTCTCTCGTCCTTGCCTTCAAACACCATCTCTTACTTCAAAGCTCAAGACTTGGGATCAAATCTCGTCCTCATATTATCAGTTTCGGCCGCAATGGAAGGAATTCGCATGTGGGTAGTCCTCCTTTTTTGTATTTTCCACATTAAAGTGACACATTGTGTGGAGGAGGAGGTCAAGAGCTCAATGATAAGCTTCCTTGCCAAACTCTCTGGCCAGCAGAGTTTTTCTACTATGAATTGGAAGGGAGACTCTGATCCTTGTACGGACCTCTGGCAAGGCGTAGCCTGCGATTCTCGTAATGTATCAGTAAGAAGGCTATTTCTAGACAGGTTGAATTTATCTGGAACTCTTGATGCTGCTATTCTCTGCAATAGTCAACCTCTAGCTGATTCTTTGATAATTCTGAGTCTTGGTGGAAACAACGTCAGAGGAGGAATAGCAGATGAGATTGGAAACTGCAAACAGATAACTCGCTTGTATTTAGGGGGAAATCAACTTTCTGGGGAACTTCCTCCTTCGCTTGCCGTGTTAAATAATCTGAAAAGGCTTGACATTTCGAACAATAAGTTTTCTGGTCACTTGCCAGGCTTGTCCAGAATCTCAGGGCTGAATGTGTTTCTCGCCCAGAACAATAACCTCAGTGGGGCGATACCCGGGTTTGATTTCTCCAACCTTTACAAGTTTAATGTTTCATTTAACAATTTTAGTGGCCGAATCCCAGATGTGCATGGCCGAATCTCTGAAGATAGCTTTTTGGGTAACCCTGAACTCTGTGGGCAACCATTGCAGAAGAACTGTGCCATTCACACTCTTAATGAAAAATCTGTAGAACCAAATGGATCAAATGAAATGAATGGATCAAATGAATCAAAGGGTCCTTCTAAAGATCAAATCCTGATGTATTCAGGATATGCTGCATTGGGTTTGGTAATTATCCTTTTCATACTTTATAAACTATGTACAAGGAAGAAAAAACAGAAGGCTGAAGCATCAAATAAGGTCGCATCAAGTAGTGATCATGATGTGTTCGACAAACCTGGCAATGCTTCAAGCGGACAAAAATCGGTAATAAGCAGATCCGAGTTTTCAGTCAACTCTGAAGGGGGGACGGTTTCACAGTCACTTATACTTCTTACACAACCAGTGGTAAGTGAATTGAGACTTGAGGACTTGCTGAGAGCCCCTGCAGAATTGCTTGGCAGAGGTAAGTATGGTAGTCTTTATAAGGTGATGCTGGACAACAGGAAGACAGTGGTTGTGAAAAGGATCAAGGACTCAGCTACTTCCAGCCATGACTTCAAGCTAAAAATGGAAACTCTAGGCCAAGTGAAGCACCCTTATGTGCTCTCACCACTTGCTTTCTATTGTTCCAATCAAGAGAAGCTTCTGGTCTACGAATTCCAGGAAAATGGAAGCTTATTCCAGCTTCTTCATGGCGAGTCAAAGGGATTTGATTGGACCAGCAGGCTAGGAATTGCAGCTATGATAGCAGAGGGATTAGCCTTCATGCATCAAGAGGTTGGGGAGAAAGGTATTGCACATGGAAACTTGAAATCCTCCAACATTTTGCTGAGCCATAACATGGAGGCACGCATAAGCGAGTATGGTGTGATGAGCATGGACGATGAACTGAGCTTATCTTCTGCAAGCCCTCGTCCTTCTGGTTCTGGGCTACCAAATGCGTTGAAGGCAGATGTGTATGGATTTGGGGTGATTCTTCTTGAGCTACTCACAGGGAAGTTAGTGAAGAACGATGGCATTGACTTGGCGGAGTGGGTCCAATCTGTTGTGAGGGAAGAATGGACTGGTGAGGTGTTTGACAAGGAACTGATATCAGAGTATGCGAGTGAAGAGAGATTGGTGAATCTGCTTCGAATGGCTATCAAATGTGTTCATCGTTCCCCAGTAGCCAGGCCATGTATGAATCAGGTGGCTCTCATGGTTAACACTATCAAAGACGAAGAAGAGAAATCTTTGATCTATGAAGCCTGA 2127 0.4335 MYTCRLVFSKYYIIHQQGILVLCYITKVLIVELANLTHSSSGNNNFLSSLPSNTISYFKAQDLGSNLVLILSVSAAMEGIRMWVVLLFCIFHIKVTHCVEEEVKSSMISFLAKLSGQQSFSTMNWKGDSDPCTDLWQGVACDSRNVSVRRLFLDRLNLSGTLDAAILCNSQPLADSLIILSLGGNNVRGGIADEIGNCKQITRLYLGGNQLSGELPPSLAVLNNLKRLDISNNKFSGHLPGLSRISGLNVFLAQNNNLSGAIPGFDFSNLYKFNVSFNNFSGRIPDVHGRISEDSFLGNPELCGQPLQKNCAIHTLNEKSVEPNGSNEMNGSNESKGPSKDQILMYSGYAALGLVIILFILYKLCTRKKKQKAEASNKVASSSDHDVFDKPGNASSGQKSVISRSEFSVNSEGGTVSQSLILLTQPVVSELRLEDLLRAPAELLGRGKYGSLYKVMLDNRKTVVVKRIKDSATSSHDFKLKMETLGQVKHPYVLSPLAFYCSNQEKLLVYEFQENGSLFQLLHGESKGFDWTSRLGIAAMIAEGLAFMHQEVGEKGIAHGNLKSSNILLSHNMEARISEYGVMSMDDELSLSSASPRPSGSGLPNALKADVYGFGVILLELLTGKLVKNDGIDLAEWVQSVVREEWTGEVFDKELISEYASEERLVNLLRMAIKCVHRSPVARPCMNQVALMVNTIKDEEEKSLIYEA 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2118g00009 708 ProSitePatterns Protein kinases ATP-binding region signature. 444 466 IPR017441 GO:0005524
Pral2118g00009 708 Pfam Protein tyrosine and serine/threonine kinase 442 689 IPR001245 GO:0004672|GO:0006468
Pral2118g00009 708 Gene3D Phosphorylase Kinase; domain 1 410 512 - -
Pral2118g00009 708 SUPERFAMILY Protein kinase-like (PK-like) 441 692 IPR011009 -
Pral2118g00009 708 ProSiteProfiles Protein kinase domain profile. 438 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2118g00009 708 SUPERFAMILY L domain-like 120 306 - -
Pral2118g00009 708 MobiDBLite consensus disorder prediction 318 338 - -
Pral2118g00009 708 Gene3D Ribonuclease Inhibitor 266 313 IPR032675 -
Pral2118g00009 708 Gene3D Ribonuclease Inhibitor 101 265 IPR032675 -
Pral2118g00009 708 Gene3D Transferase(Phosphotransferase) domain 1 514 707 - -
Pral2118g00009 708 MobiDBLite consensus disorder prediction 373 401 - -
Pral2118g00009 708 Pfam Leucine Rich Repeat 224 240 IPR001611 GO:0005515
Pral2118g00009 708 PANTHER OS05G0588300 PROTEIN 84 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2118g00009 Pral-Chr2118 42323 44540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2118g00009 113 697 Receptor kinase-like Gene Family AT1G68400 33.760 6.44e-96 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral2118g00009 PK_Tyr_Ser-Thr 5.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2118g00009 - - gmx:100813796 790.415