Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2117g00013 ATGGCTTCCTTCCAGAACTTCAACTTGGGAACCCAGATCCCGGAAGACGTTCTCATTGCTCAAATCATGCAGCTTCATGCAGACATATCAAAGCTTGAATCCCTTAGGCCTTCCAAGCAAGTGAACAGTCTCTTCACTCACCTCGTCAATCTCTGCACCCTTCCTTCCTCCATTAACATTCAATCTTTGCCCCAAGATGTGAAGAACATGAGGGAGAGTCTCATTAACCTTTGTGGACAAGCTGAAGGCCTTTTGGAGTTAGAATTCTCATCTTTTCTTGCCCAAATTCCCAAACCTTTGAACAACCTCACTCTCTTCCCATACTATGGGAATTACGTCAAACTAGCAAACCTAGAAAACAAAATCCTCAGAGACAATGGTTTGGTCCATCCCAAGAAGGTAGCTTTTGTGGGGTCTGGTCCAATGCCACTCACTTCCCTCATAATGGCCACACATCACTTGGCATCCACAAAATTTGACAACTTCGACATCGATGAGAAAGCCAACGAGGCAGCTTGTAGGATCGTTGCTACAGACTCAGAGCTTGAGAAGAGGATGAAGTTTGAGACAAAAGATATCATGCAAATTAAAGAGAAATTGGTACAATATGACTGTATCTTCTTAGCAGCTCTTGTGGGAATGAGCAGAGAAGCAAAAGTGAAGATTTTGGGACACTTGGGTGAGTATATGAAGGAGGGAGGGTTCTTGCTTGTGAGAAGTGCAAAAGGGGCAAGGGCTTTCTTGTACCCTGTTGTGGAAGAGCAAGATTTGGGCAATTTTGAGGTTCTTACGATATTTCATCCCACAAACGATGTGATCAACTCAGTTGTTCTTCTTCGCAAGCCTATGGTTTAG 855 0.4386 MASFQNFNLGTQIPEDVLIAQIMQLHADISKLESLRPSKQVNSLFTHLVNLCTLPSSINIQSLPQDVKNMRESLINLCGQAEGLLELEFSSFLAQIPKPLNNLTLFPYYGNYVKLANLENKILRDNGLVHPKKVAFVGSGPMPLTSLIMATHHLASTKFDNFDIDEKANEAACRIVATDSELEKRMKFETKDIMQIKEKLVQYDCIFLAALVGMSREAKVKILGHLGEYMKEGGFLLVRSAKGARAFLYPVVEEQDLGNFEVLTIFHPTNDVINSVVLLRKPMV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2117g00013 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Pral2117g00013 284 Gene3D Vaccinia Virus protein VP39 17 282 IPR029063 -
Pral2117g00013 284 PANTHER NICOTIANAMINE SYNTHASE 3 15 282 IPR004298 GO:0030410|GO:0030418
Pral2117g00013 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 240 IPR029063 -
Pral2117g00013 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2117g00013 Pral-Chr2117 110179 111033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2117g00013 16 281 Nicotianamine Synthase Gene Family AT5G56080 52.963 2.01e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2117g00013 K05953 - gmx:100819726 438.343