Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2117g00002 ATGGTAACTTCCGTAAATCTTCATCAGCTCAATCTGTCTGGTGCTTTATCTCCCACCATCTGTAACCTTCCACGGCTAGTTGAGTTGAATCTGTCGAAAAATTTCATTTCTGGTCCTATTCCTGTGGATTTTGTTGACTGTCGTAGTTTGGAGATATTAGACCTTTGCACAAATAGGTTCCATGGGGAACTTCTGATTCCTTTCAGCGAAATCACCACACTAAGAAAGCTTTATGTCTGTGAAAATTTCATGCATGGTGAAGTGCCTGAAGAGATTGGGAATTTAACTTCACTTGAAGAGCTAGTTATTTATAGCAACAACTTAACTGGGAGAATTCCCACATCAATCAGTAAGTTGAAGCAGCTTAAAATCATCAGGGCAGGTGTTAACAGCATCTCAGGTCCAATACCTGCGGAAATAAGCCAGTGTGAGAGCTTGCAGATATTAGGATTCTCACAGAATCAGCTAGAAGGGTCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTGCTGAGTTAAATCTATGGCAAAACTTTTTATCTGGTGAGATCCCTCCTGAGATTGGAAATCTTAGTAGCTTGCAATCGCTTGCTTTGCATCATAATTCATTTGGTGGAGCTCTCCCCAAGGAGCTTGGAAAGTTATCAAATTTACAAAGGTTGTACATATACACTAACCGCTTGAATGGCTCAATTCCGGTGGAGCTAGGGAACTGCACAAATGCAATTGAGATAGATCTGTCTGAAAATCGTTTAAGTGGAAATATTCCCAAAGAGTTGGGTCAGATCTCTGGTCTTACATTGCTTCATCTATTTGAAAACCTCCTGCAGGGAGACATACCTCAAGAGCTTGGGAATTTAAAGCTCTTAAAGAATTTAGACCTCTCCATAAATAACTTATCAGGTACAATACCACTAGTGTTTCAAAATCTTACATACATGGTGGATTTGCAGTTGTTTGATAATCACCTTCAGGGTAAAATTCCTCCTTATCTTGGATCTAATAGCAACCTTACAGTTCTTGATATATCCATGAATTATCTTATTGGTATGATACCTCCGCATCTTTGCCGCAATCAGAAATTGCAGTTCCTCAGTCTTGGGTCAAATAAATTGCTTGGCAATATTCCTCATGACCTGAAAATGTGCAAGCCTCTTGTGCAGCTAATGCTGGGAGACAACCAACTGACAGGAAGCTTCCCTCTTGAATTATATGAACTTCATAATCTTTCTGCCCTCGAACTTCAGCAGAACCGGTTCTCAGGACTAATAGACCATGGGATAGGTCGACTCAAGAATTTAAAGAGGCTGCTCTTATCAGATAACTATTTTTTAGGCTATCTTCCTCCTGAGATTGGGAATTTAACACAGCTTGTCTCATTCAACATTTCCTCTAATTTTCTCAGTGGAAGTATACCTCATGAGTTGGGAAACTGCATAAAACTCCAGAGGCTTGATCTGAGTAGAAACGGGTTCACTGGTGATCTTCCAGATGATATTGGCAAGCTGGTGAATCTGGAGCTGTTGAAACTTTCAGATAATAGACTCTCTGGAACAATACCGAGTGCTTTAGGGGACCTTTCACGTCTTACAGATTTGGAACTCGGCGGTAACTTGTTTTTTGGGAGCATTCCTTTTCATTTAGGACAATTAGCTGCTCTTCAGATTGCTCTTAACCTGAGTTATAACAAACTTTCTGGTACAATTCCTGACAGCCTTGGGAGCTTGCAAATGTTGGAAAGTCTTTATTTAAATGACAATCAGCTTGTTGGTGAAATTCCTACATCAATTGGTGACCTTCCCAGCCTCTTACTATGCAATGTTTCCAACAATAAACTGGTAGGGGTCATTCCAGACACGCCGGCATTTCGTAAGATGAATTTTACAAATTTTGCTGGAAACAATGGGTTGTGTCGAGTAGGTTCATATTATTGTCATCCATCTCATACTCCAAGCTGGTCCAGAGATGGTTCATCAAAGCAAAAGATAGTGAGCATTGTTTCTGCAGTGGTGGGATTTGTTTCTCTCATTTTCATAGTCTTTATATGTTGGGCCATGAAACGCCGTGGCTCTTCTTTTGTCTCAATTGAGGGGCAATCAAAACCTCATGTCCTAGATAACTATTACTTCCCTAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCTACTAGCAATTTTTCTGAAGCTTTGGTTATAGGAAGAGGAGCTTGTGGAACTGTCTACAAGGCTGTTCTGACCGATGGTGAGGTGATAGCTGTCAAAAAGTTGAATTCTCGTGGAGAAGGAGCAAATGTAGACAGAAGTTTCCTTGCAGAAATTTCGACTCTGGGAAAGATCAGGCACAGAAATATTGTGAAGCTGTTTGGATTCTGTTGTCATGAGGATTCTAATATTCTCTTGTATGAATACATGGAAAATGGTAGCCTTGGTGAACAACTTCATTCAGATCCAAACACATGTATATTGGGTTGGAGCAGTCGCTACAAAATTGCTCTTGGAGCAGCAGAAGGCTTGTGCTATCTTCATTACGATTGTAAACCTCAAATTATCCACCGCGATATAAAGTCAAACAATATATTGCTCGATGAGGTGTATCAGGCTCATGTTGGAGACTTTGGCCTGGCTAAGTTGGTCGACTTTTCCTACTCCAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATATATAGCTTCGGGGTAGTTTTGCTGGAACTAGTTACTGGCAGGTCACCTGTGCAACCTTTGGAGCAAGGTGGTGATCTAGTTACTTGGGTGAGAAGGTCAATTCAAGCGTCAGTACCAACATCTGAATTATTTGACAGAAGATTAAATCTGAGTGCACAAAAAACAATCGACGAGATGTCTCTTGTTCTCAAAATTGCTCTGTTTTGCACCAGTACATCCCCACTTAATAGGCCAACAATGAAAGAGGTCATTGCGATGTTGATTGATGCTAGGGAGTATGTCAACAATTCTCCATTGACTCCGACATCAGAATCCCCACTAGATGAAGATGCTTCGTCCAAAGGTGATCTAGAGTTTTAA 3099 0.4088 MVTSVNLHQLNLSGALSPTICNLPRLVELNLSKNFISGPIPVDFVDCRSLEILDLCTNRFHGELLIPFSEITTLRKLYVCENFMHGEVPEEIGNLTSLEELVIYSNNLTGRIPTSISKLKQLKIIRAGVNSISGPIPAEISQCESLQILGFSQNQLEGSIPRELQKLQNLAELNLWQNFLSGEIPPEIGNLSSLQSLALHHNSFGGALPKELGKLSNLQRLYIYTNRLNGSIPVELGNCTNAIEIDLSENRLSGNIPKELGQISGLTLLHLFENLLQGDIPQELGNLKLLKNLDLSINNLSGTIPLVFQNLTYMVDLQLFDNHLQGKIPPYLGSNSNLTVLDISMNYLIGMIPPHLCRNQKLQFLSLGSNKLLGNIPHDLKMCKPLVQLMLGDNQLTGSFPLELYELHNLSALELQQNRFSGLIDHGIGRLKNLKRLLLSDNYFLGYLPPEIGNLTQLVSFNISSNFLSGSIPHELGNCIKLQRLDLSRNGFTGDLPDDIGKLVNLELLKLSDNRLSGTIPSALGDLSRLTDLELGGNLFFGSIPFHLGQLAALQIALNLSYNKLSGTIPDSLGSLQMLESLYLNDNQLVGEIPTSIGDLPSLLLCNVSNNKLVGVIPDTPAFRKMNFTNFAGNNGLCRVGSYYCHPSHTPSWSRDGSSKQKIVSIVSAVVGFVSLIFIVFICWAMKRRGSSFVSIEGQSKPHVLDNYYFPKEGFTYQDLLEATSNFSEALVIGRGACGTVYKAVLTDGEVIAVKKLNSRGEGANVDRSFLAEISTLGKIRHRNIVKLFGFCCHEDSNILLYEYMENGSLGEQLHSDPNTCILGWSSRYKIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEVYQAHVGDFGLAKLVDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASVPTSELFDRRLNLSAQKTIDEMSLVLKIALFCTSTSPLNRPTMKEVIAMLIDAREYVNNSPLTPTSESPLDEDASSKGDLEF 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2117g00002 1032 Pfam Protein kinase domain 732 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2117g00002 1032 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 335 649 - -
Pral2117g00002 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Pral2117g00002 1032 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 68 331 - -
Pral2117g00002 1032 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Pral2117g00002 1032 Gene3D Transferase(Phosphotransferase) domain 1 805 1016 - -
Pral2117g00002 1032 Pfam Leucine rich repeat 481 539 IPR001611 GO:0005515
Pral2117g00002 1032 SUPERFAMILY RNI-like 4 310 - -
Pral2117g00002 1032 SMART LRR_typ_2 95 119 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 287 310 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 431 455 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 215 239 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 576 600 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 167 191 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 407 430 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 503 527 IPR003591 -
Pral2117g00002 1032 SMART LRR_typ_2 23 47 IPR003591 -
Pral2117g00002 1032 SUPERFAMILY RNI-like 292 616 - -
Pral2117g00002 1032 ProSiteProfiles Protein kinase domain profile. 727 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2117g00002 1032 Gene3D Ribonuclease Inhibitor 318 651 IPR032675 -
Pral2117g00002 1032 Gene3D Phosphorylase Kinase; domain 1 693 804 - -
Pral2117g00002 1032 PANTHER RECEPTOR-LIKE PROTEIN 55 386 1001 - -
Pral2117g00002 1032 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 805 1017 - -
Pral2117g00002 1032 MobiDBLite consensus disorder prediction 1010 1032 - -
Pral2117g00002 1032 Gene3D Ribonuclease Inhibitor 164 317 IPR032675 -
Pral2117g00002 1032 SMART serkin_6 727 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2117g00002 1032 SMART LRR_sd22_2 143 172 - -
Pral2117g00002 1032 SMART LRR_sd22_2 576 602 - -
Pral2117g00002 1032 SMART LRR_sd22_2 503 529 - -
Pral2117g00002 1032 SMART LRR_sd22_2 359 378 - -
Pral2117g00002 1032 SMART LRR_sd22_2 95 121 - -
Pral2117g00002 1032 SMART LRR_sd22_2 215 236 - -
Pral2117g00002 1032 SUPERFAMILY Protein kinase-like (PK-like) 704 1000 IPR011009 -
Pral2117g00002 1032 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 692 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2117g00002 Pral-Chr2117 5780 11126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2117g00002 2 1005 Receptor kinase-like Gene Family AT1G73080 38.389 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2117g00002 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2117g00002 - - gmx:100818311 1630.15