Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2114g00001 ATGGCGAGGATCAAGGTTCATGAGCTCAGGCAGAAAACGAGGGCCGAATTGCAGAACCAGCTTAAGGACCTGAAAGCTGAGCTTGCTTTGCTCCGTGTCGCTAAAGTCACTGGTGGTGCTCCCAACAAGCTCTCCAAGATAAAGGTAGTGAGGTTGTCCATTGCCCAAGTGTTGACGGTGATTTCTCAGACGCAGAAGGCTGCACTGAGGGAAGCCTATAAAAACAAGAAGTACATGCCTCTTGATCTGCGCCCAAAGAAGACCAGGGCTATTCGCAGACGGCTTACCAAGCACCAGGTAATAACTTTTCTTGGTGGCCTTGACTCATAA 330 0.497 MARIKVHELRQKTRAELQNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQTQKAALREAYKNKKYMPLDLRPKKTRAIRRRLTKHQVITFLGGLDS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2114g00001 109 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Pral2114g00001 109 FunFam 60S ribosomal protein L35 1 77 - -
Pral2114g00001 109 PANTHER 60S RIBOSOMAL PROTEIN L35 1 99 IPR045059 GO:0000463|GO:0022625
Pral2114g00001 109 Pfam Ribosomal L29 protein 8 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pral2114g00001 109 Gene3D - 78 103 - -
Pral2114g00001 109 Coils Coil 7 34 - -
Pral2114g00001 109 SUPERFAMILY Ribosomal protein L29 (L29p) 4 64 IPR036049 GO:0003735|GO:0005840|GO:0006412
Pral2114g00001 109 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Pral2114g00001 109 CDD Ribosomal_L29_HIP 8 63 - -
Pral2114g00001 109 NCBIfam 50S ribosomal protein L29 8 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2114g00001 Pral-Chr2114 85 1126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2114g00001 1 99 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 87.879 1.71e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2114g00001 K02918 - rcu:8285776 180.259