Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2113g00005 ATGGCTCTCAGCATGAAAGCAGTGTTGGTAATAGGGCTTGCCATCTTGAGCCTTTTCTCAGTGGCTTCTGCCATTTCTGGAACTGCCACCTTTTACACTGTCTATGTTCCCTCGGCATGTTATGGATATCAAGATCAAGGGACTATGATCGCAGCAGCAAGCGACCCAATCTTTAACAATGGAGCTGCATGTGGAAGACGGTACAGAGTGAGGTGCACGGGTGGCACCAACAGTGTGCCTAATCCTTGCAAGGCGGGAACCGTCACCGTCAAGGTTGTCGACCGCTGCCCTTCGCCCGGATGCCGAGCAACCTTGGACCTCTCTCGGGAAGCTTTCTCTCGTATTGCTAACCCTGACGCTGGAAAAGTCAACATTGACTATGTCCCGGTCTGA 393 0.5216 MALSMKAVLVIGLAILSLFSVASAISGTATFYTVYVPSACYGYQDQGTMIAAASDPIFNNGAACGRRYRVRCTGGTNSVPNPCKAGTVTVKVVDRCPSPGCRATLDLSREAFSRIANPDAGKVNIDYVPV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2113g00005 130 SMART dpbb_1 50 127 IPR007112 -
Pral2113g00005 130 FunFam Barwin-related endoglucanase 24 129 - -
Pral2113g00005 130 SUPERFAMILY Barwin-like endoglucanases 15 130 IPR036908 -
Pral2113g00005 130 CDD DPBB_EG45-like 25 128 - -
Pral2113g00005 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 128 IPR044206 GO:0009627|GO:0048046
Pral2113g00005 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
Pral2113g00005 130 Pfam Lytic transglycolase 51 127 IPR009009 -
Pral2113g00005 130 Gene3D - 18 130 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2113g00005 Pral-Chr2113 24188 25709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2113g00005 27 127 Expansin Gene Family AT2G40610 34.146 8.09e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2113g00005 - - aew:130796557 194.897